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1Approximating Projections of Conformational Boltzmann Distributions with AlphaFold2 Predictions: Opportunities and Limitations
B. Brown, R. Stein, J. Meiler, and H. Mchaourab. Journal of Chemical Theory and Computation, 20 (3): 1434â1447 (January 2024)
19 hours ago by @scadsfct
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imported
topic_lifescience
importedtopic_lifescience
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1Benchmarking AlphaMissense pathogenicity predictions against cystic fibrosis variants
E. McDonald, K. Oliver, J. Schlebach, J. Meiler, and L. Plate. PLOS ONE, 19 (1): e0297560 (January 2024)
19 hours ago by @scadsfct
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imported
topic_lifescience
importedtopic_lifescience
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1A comparative patient-level prediction study in OMOP CDM: applicative potential and insights from synthetic data
N. Ahmadi, Q. Nguyen, M. Sedlmayr, and M. Wolfien. Scientific Reports, 14 (1): 2287 (January 2024)
2 months ago by @scadsfct
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topic_lifescience
topic_lifescience
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1ConvGeN: A convex space learning approach for deep-generative oversampling and imbalanced classification of small tabular datasets
K. Schultz, S. Bej, W. Hahn, M. Wolfien, P. Srivastava, and O. Wolkenhauer. Pattern Recognition, (2024)
2 months ago by @scadsfct
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Tabular
Convex
Imbalanced
learning,
GAN,
data
topic_lifescience
LoRAS,
space
data,
TabularConvexImbalancedlearning,GAN,datatopic_lifescienceLoRAS,spacedata,
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1Fuzzy simplicial sets and their application to geometric data analysis
L. Barth, Fatemeh, Fahimi, P. Joharinad, J. Jost, J. Keck, and T. Mikhail. (2024)
2 months ago by @scadsfct
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imported
topic_mathfoundation
topic_lifescience
importedtopic_mathfoundationtopic_lifescience
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1Federated Learning on Transcriptomic Data: Model Quality and Performance Trade-Offs
A. Hannemann, J. Ewald, L. Seeger, and E. Buchmann. Computational Science – ICCS 2024: 24th International Conference, Malaga, Spain, July 2–4, 2024, Proceedings, Part IV, page 279–293. Berlin, Heidelberg, Springer-Verlag, (2024)
11 days ago by @scadsfct
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Prognosis
Learning,
Type
Disease
topic_lifescience
Classification,
Federated
Cell
area_responsibleai
PrognosisLearning,TypeDiseasetopic_lifescienceClassification,FederatedCellarea_responsibleai
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1MutationExplorer: a webserver for mutation of proteins and 3D visualization of energetic impacts
M. Philipp, C. Moth, N. Ristic, J. Tiemann, F. Seufert, A. Panfilova, J. Meiler, P. Hildebrand, A. Stein, D. Wiegreffe and 1 other author(s). Nucleic Acids Research, (2024)
4 days ago by @scadsfct
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3d
mutation
topic_lifescience
proteins
mutationexplorer
webserver
3dmutationtopic_lifescienceproteinsmutationexplorerwebserver
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1Backbone chemical shift and secondary structure assignments for mouse siderocalin
J. Moeller, N. Bozhanova, M. Voehler, J. Meiler, and C. Schoeder. Biomolecular NMR Assignments, 18 (1): 79--84 (2024)
4 days ago by @scadsfct
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secondary_structure_assignment
topic_lifescience
mouse_siderocalin
backbone_chemical_shift
secondary_structure_assignmenttopic_lifesciencemouse_siderocalinbackbone_chemical_shift
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1Machine learning algorithms predict canine structural epilepsy with high accuracy
T. Flegel, A. Neumann, A. Holst, O. Kretzschmann, S. Loderstedt, C. Tästensen, S. Gutmann, J. Dietzel, L. Becker, T. Kalliwoda and 4 other author(s). Frontiers in Veterinary Science, (2024)
2 months ago by @scadsfct
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topic_lifescience
topic_lifescience
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1Live and Interactive 3D Photomanipulation under the Microscope using Virtual Reality
J. Tiemann, M. McGinity, I. Sbalzarini, and U. Günther. Extended Abstracts of the 2024 CHI Conference on Human Factors in Computing Systems, New York, NY, USA, Association for Computing Machinery, (2024)
2 months ago by @scadsfct
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microscope
virtual
visualization
interaction,
topic_lifescience
control,
human-computer
reality,
microscopevirtualvisualizationinteraction,topic_lifesciencecontrol,human-computerreality,
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1A belowground perspective on the nexus between biodiversity change, climate change, and human well-being
N. Eisenhauer, K. Frank, A. Weigelt, B. Bartkowski, R. Beugnon, K. Liebal, M. Mahecha, M. Quaas, D. Al-Halbouni, A. Bastos and 38 other author(s). Journal of Sustainable Agriculture and Environment, 3 (2): e212108 (2024)
2 months ago by @scadsfct
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change,
well-being,
biodiversity
topic_earthenvironment
topic_lifescience
climate
soil
human
change,well-being,biodiversitytopic_earthenvironmenttopic_lifescienceclimatesoilhuman
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1Streamlining intersectoral provision of real-world health data: a service platform for improved clinical research and patient care
K. Hoffmann, I. Nesterow, Y. Peng, E. Henke, D. Barnett, C. Klengel, M. Gruhl, M. Bartos, F. Nüßler, R. Gebler and 7 other author(s). Frontiers in Medicine, (2024)
2 months ago by @scadsfct
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topic_lifescience
topic_lifescience
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1Federated learning on transcriptomic data: Model quality and performance trade-offs
A. Hannemann, J. Ewald, L. Seeger, and E. Buchmann. (2024)
2 months ago by @scadsfct
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topic_lifescience
area_responsibleai
topic_lifesciencearea_responsibleai
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1Artificial Intelligence Reporting Guidelines’ Adherence in Nephrology for Improved Research and Clinical Outcomes
A. Salybekov, M. Wolfien, W. Hahn, S. Hidaka, and S. Kobayashi. Biomedicines, (2024)
2 months ago by @scadsfct
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topic_lifescience
topic_lifescience
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1IsUMap: Manifold Learning and Data Visualization leveraging Vietoris-Rips filtrations
L. Barth, Fatemeh, Fahimi, P. Joharinad, J. Jost, and J. Keck. (2024)
2 months ago by @scadsfct
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imported
topic_mathfoundation
topic_lifescience
importedtopic_mathfoundationtopic_lifescience
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1Combining Rosetta Sequence Design with Protein Language Model Predictions Using Evolutionary Scale Modeling (ESM) as Restraint
M. Ertelt, J. Meiler, and C. Schoeder. ACS Synthetic Biology, 13 (4): 1085--1092 (2024)
4 days ago by @scadsfct
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sequence
design
rosetta
protein
topic_lifescience
combining
ESM
sequencedesignrosettaproteintopic_lifesciencecombiningESM
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1Is protein BLAST a thing of the past?
A. Al-Fatlawi, M. Menzel, and M. Schroeder. Nat. Commun., 14 (1): 8195 (December 2023)
2 months ago by @scadsfct
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topic_lifescience
topic_lifescience
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1A time-resolved meta-analysis of consensus gene expression profiles during human T-cell activation
M. Rade, S. Böhlen, V. Neuhaus, D. Löffler, C. Blumert, M. Merz, U. Köhl, S. Dehmel, K. Sewald, and K. Reiche. Genome Biol., 24 (1): 287 (December 2023)
2 months ago by @scadsfct
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activation;
profiles;
gene
T-cell
Transcriptome
Time
matrix
factorization;
Biomarkers;
Non-negative
expression;
Gene
Temporal
topic_lifescience
series;
activation;profiles;geneT-cellTranscriptomeTimematrixfactorization;Biomarkers;Non-negativeexpression;GeneTemporaltopic_lifescienceseries;
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1Divergent Pairwise Epistasis in the Context of Unstable Membrane Protein Variants
L. Chamness, C. Kuntz, A. McKee, W. Penn, C. Hemmerich, D. Rusch, H. Woods, Dyotima, J. Meiler, and J. Schlebach. (December 2023)
19 hours ago by @scadsfct
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imported
topic_lifescience
importedtopic_lifescience
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1Entropically damped artificial compressibility for the discretization corrected particle strength exchange method in incompressible fluid mechanics
A. Singh, I. Sbalzarini, and A. Obeidat. Computers & Fluids, (December 2023)
2 months ago by @scadsfct
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topic_lifescience
importedtopic_lifescience
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publications (hide)259
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1Approximating Projections of Conformational Boltzmann Distributions with AlphaFold2 Predictions: Opportunities and Limitations

1Benchmarking AlphaMissense pathogenicity predictions against cystic fibrosis variants

1A comparative patient-level prediction study in OMOP CDM: applicative potential and insights from synthetic data

1ConvGeN: A convex space learning approach for deep-generative oversampling and imbalanced classification of small tabular datasets

1Fuzzy simplicial sets and their application to geometric data analysis

1Federated Learning on Transcriptomic Data: Model Quality and Performance Trade-Offs

1MutationExplorer: a webserver for mutation of proteins and 3D visualization of energetic impacts

1Backbone chemical shift and secondary structure assignments for mouse siderocalin

1Machine learning algorithms predict canine structural epilepsy with high accuracy

1Live and Interactive 3D Photomanipulation under the Microscope using Virtual Reality

1A belowground perspective on the nexus between biodiversity change, climate change, and human well-being

1Streamlining intersectoral provision of real-world health data: a service platform for improved clinical research and patient care

1Federated learning on transcriptomic data: Model quality and performance trade-offs

1Artificial Intelligence Reporting Guidelines’ Adherence in Nephrology for Improved Research and Clinical Outcomes

1IsUMap: Manifold Learning and Data Visualization leveraging Vietoris-Rips filtrations

1Combining Rosetta Sequence Design with Protein Language Model Predictions Using Evolutionary Scale Modeling (ESM) as Restraint

1Is protein BLAST a thing of the past?

1A time-resolved meta-analysis of consensus gene expression profiles during human T-cell activation

1Divergent Pairwise Epistasis in the Context of Unstable Membrane Protein Variants

1Entropically damped artificial compressibility for the discretization corrected particle strength exchange method in incompressible fluid mechanics

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