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1BTW2021 erstmals als digitale Vortragsreihe
W. Lehner, K. Sattler, and J. Freytag. Datenbank-Spektrum, 22 (1): 67--71 (Mar 1, 2022)
2 months ago by @scadsfct
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1A Journey to the Frontiers of Query Rewritability
P. Ostropolski-Nalewaja, J. Marcinkowski, D. Carral, and S. Rudolph. Proceedings of the 41st Symposium on Principles of Database Systems (PODS'22), page 359-367. ACM, (June 2022)
2 months ago by @scadsfct
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13D Point Set Registration based on Hierarchical Descriptors
S. Dutta, B. Russig, and S. Gumhold. Journal of WSCG, (August 2022)
2 months ago by @scadsfct
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1Causal discovery with endogenous context variables
W. Günther, O. Popescu, M. Rabel, U. Ninad, A. Gerhardus, and J. Runge. (2024)
2 months ago by @scadsfct
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1Changing Lanes Toward Open Science: Openness and Transparency in Automotive User Research
P. Ebel, P. Bazilinskyy, M. Colley, C. Goodridge, P. Hock, C. Janssen, H. Sandhaus, A. Srinivasan, and P. Wintersberger. (July 2024)
2 months ago by @scadsfct
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1Comparing Symbolic and Embedding-Based Approaches for Relational Blocking
D. Obraczka, and E. Rahm. Knowledge Engineering and Knowledge Management - 24th International Conference, EKAW 2024, Amsterdam, The Netherlands, November 26-28, 2024, Proceedings, volume 15370 of Lecture Notes in Computer Science, page 155--173. Springer, (2024)
2 months ago by @scadsfct
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1Constraining uncertainty in projected precipitation over land with causal discovery
K. Debeire, L. Bock, P. Nowack, J. Runge, and V. Eyring. EGUsphere, (2024)
2 months ago by @scadsfct
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1DA-CGRA: Domain-Aware Heterogeneous Coarse-Grained Reconfigurable Architecture for the Edge
E. Aliagha, N. Charaf, N. Venkatesan, and D. Göhringer. 2024 27th Euromicro Conference on Digital System Design (DSD), page 410-417. (August 2024)
2 months ago by @scadsfct
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1Deep Learning of Multivariate Extremes via a Geometric Representation
C. Murphy-Barltrop, R. Majumder, and J. Richards. (2024)
2 months ago by @scadsfct
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1Der Tragödie erster Teil?
M. Kutz. Ethik und Gesellschaft, (2024)
2 months ago by @scadsfct
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1Differentially Private Multi-Label Learning Is Harder Than You'd Think
A. Hannemann, B. Friedl, and E. Buchmann. 2024 IEEE European Symposium on Security and Privacy Workshops (EuroS&PW), page 40-47. (July 2024)
2 months ago by @scadsfct
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1Distinguishing word identity and sequence context in DNA language models
M. Sanabria, J. Hirsch, and A. Poetsch. BMC Bioinformatics, 25 (1): 301 (Sep 13, 2024)
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1Effectiveness and Acceptance of Conversational Agent-based Psychotherapy for Depression and Anxiety Treatment: Methodological Literature Review
J. Striegl, S. Rottmann, and C. Loitsch. (February 2024)
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1From Guesswork to Game Plan: Exploring Problem-Solving-Strategies in a Machine Learning Game
C. Witt, T. Leonhardt, E. Marx, and N. Bergner. Informatics in Schools. Innovative Approaches to Computer Science Teaching and Learning, page 73--84. Cham, Springer Nature Switzerland, (2025)
2 months ago by @scadsfct
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1Fast Switching Serial and Parallel Paradigms of SNN Inference on Multi-core Heterogeneous Neuromorphic Platform SpiNNaker2
J. Huang, B. Vogginger, F. Kelber, H. Gonzalez, K. Knobloch, and C. Mayr. (2024)
2 months ago by @scadsfct
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1Finite Groundings for ASP with Functions: A Journey through Consistency
L. Gerlach, D. Carral, and M. Hecher. (2024)
2 months ago by @scadsfct
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1Gesture retrieval and its application to the study of multimodal communication
Parian-Scherb, Mahnaz, Uhrig, Peter, Rossetto, Luca, Dupont, Stephane, and Schuldt, Heiko. (2024)
2 months ago by @scadsfct
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2High-level programming abstractions and compilation for near and in-memory computing
J. Castrillon. Minisymposium on Applications and Benefits of UPMEM commercial Massively Parallel Processing-In-Memory Platform (ABUMPIMP 2024) @ Euro-Par 2024 (invited talk), (August 2024)
2 months ago by @scadsfct
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1IHMCIF: An Extension of the PDBx/mmCIF Data Standard for Integrative Structure Determination Methods
B. Vallat, B. Webb, J. Westbrook, T. Goddard, C. Hanke, A. Graziadei, E. Peisach, A. Zalevsky, J. Sagendorf, H. Tangmunarunkit and 25 other author(s). Journal of Molecular Biology, (March 2024)
2 months ago by @scadsfct
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1Whitney's connectivity inequalities for directed hypergraphs
A. Arguello, and P. Stadler. The Art of Discrete and Applied Mathematics, 5 (1): P1--01 (2022)
2 months ago by @scadsfct
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1Virus evolution on fitness landscapes
P. Schuster, and P. Stadler. Viral Fitness and Evolution: Population Dynamics and Adaptive Mechanisms, Springer, (2023)
2 months ago by @scadsfct
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1Unique least common ancestors and clusters in directed acyclic graphs
A. Shanavas, M. Changat, M. Hellmuth, and P. Stadler. Conference on Algorithms and Discrete Applied Mathematics, page 148--161. Springer, (2024)
2 months ago by @scadsfct
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1Toward a Systematic Assessment of Sex Differences in Cystic Fibrosis
C. Gärtner, J. Fallmann, P. Stadler, T. Kaiser, and S. Berkemer. Journal of Personalized Medicine, 13 (6): 924 (2023)
2 months ago by @scadsfct
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1The theory of gene family histories
M. Hellmuth, and P. Stadler. Comparative Genomics: Methods and Protocols, Springer, (2024)
2 months ago by @scadsfct
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1The six stages of the convergence of the periodic system to its final structure
A. Bran, P. Stadler, J. Jost, and G. Restrepo. Communications Chemistry, 6 (1): 87 (2023)
2 months ago by @scadsfct
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1The expansion of chemical space in 1826 and in the 1840s prompted the convergence to the periodic system
W. Leal, E. Llanos, A. Bernal, P. Stadler, J. Jost, and G. Restrepo. Proceedings of the National Academy of Sciences, 119 (30): e2119083119 (2022)
2 months ago by @scadsfct
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1Temperature-Dependent tRNA Modifications in Bacillales
A. Hoffmann, C. Lorenz, J. Fallmann, P. Wolff, A. Lechner, H. Betat, M. Mörl, and P. Stadler. International Journal of Molecular Sciences, 25 (16): 8823 (2024)
2 months ago by @scadsfct
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1Taking identity-by-descent analysis into the wild: Estimating realized relatedness in free-ranging macaques
A. Freudiger, V. Jovanovic, Y. Huang, N. Snyder-Mackler, D. Conrad, B. Miller, M. Montague, H. Westphal, P. Stadler, S. Bley and 1 other author(s). bioRxiv, (2024)
2 months ago by @scadsfct
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1Synthetic riboswitches for the analysis of tRNA processing by eukaryotic RNase P enzymes
A. Ender, N. Grafl, T. Kolberg, S. Findeiß, P. Stadler, and M. Mörl. RNA, 28 (4): 551--567 (2022)
2 months ago by @scadsfct
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1StandEnA: a customizable workflow for standardized annotation and generating a presence--absence matrix of proteins
F. Chafra, F. Borim Correa, F. Oni, {. Konu Karakayalı, P. Stadler, and U. Nunes da Rocha. Bioinformatics Advances, 3 (1): vbad069 (2023)
2 months ago by @scadsfct
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1Sorting signed permutations by tandem duplication random loss and inverse tandem duplication random loss
B. Schmidt, T. Hartmann, and P. Stadler. Advances in Applied Mathematics, (2024)
2 months ago by @scadsfct
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1Salt corrections for RNA secondary structures in the ViennaRNA package
H. Yao, R. Lorenz, I. Hofacker, and P. Stadler. bioRxiv, (2023)
2 months ago by @scadsfct
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1RNA interaction format: a general data format for RNA interactions
R. Schäfer, D. Rabsch, G. Scholz, P. Stadler, W. Hess, R. Backofen, J. Fallmann, and B. Voß. Bioinformatics, 39 (11): btad665 (2023)
2 months ago by @scadsfct
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1RNA design principles for riboswitches that regulate RNase P-mediated tRNA processing
A. Ender, P. Stadler, M. Mörl, and S. Findeiß. Riboregulator Design and Analysis, Springer, (2022)
2 months ago by @scadsfct
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1REvolutionH-tl: Reconstruction of Evolutionary Histories tool
J. Ram\'ırez-Rafael, A. Korchmaros, K. Aviña-Padilla, A. López Sánchez, A. España-Tinajero, M. Hellmuth, P. Stadler, and M. Hernández-Rosales. RECOMB International Workshop on Comparative Genomics, page 89--109. Springer, (2024)
2 months ago by @scadsfct
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1Reaction rebalancing: a novel approach to curating reaction databases
T. Phan, K. Weinbauer, T. Gärtner, D. Merkle, J. Andersen, R. Fagerberg, and P. Stadler. Journal of Cheminformatics, 16 (1): 82 (2024)
2 months ago by @scadsfct
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1Proteinortho6: pseudo-reciprocal best alignment heuristic for graph-based detection of (co-) orthologs
P. Klemm, P. Stadler, and M. Lechner. Frontiers in Bioinformatics, (2023)
2 months ago by @scadsfct
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1Phylogenetic information as soft constraints in RNA secondary structure prediction
S. von Löhneysen, T. Spicher, Y. Varenyk, H. Yao, R. Lorenz, I. Hofacker, and P. Stadler. International Symposium on Bioinformatics Research and Applications, page 267--279. Springer, (2023)
2 months ago by @scadsfct
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1Phylogenetic and Chemical Probing Information as Soft Constraints in RNA Secondary Structure Prediction
S. von Löhneysen, T. Spicher, Y. Varenyk, H. Yao, R. Lorenz, I. Hofacker, and P. Stadler. Journal of Computational Biology, 31 (6): 549--563 (2024)
2 months ago by @scadsfct
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1Periodic system converges and is affected by wars
A. Bran, P. Stadler, J. Jost, and G. Restrepo. (2022)
2 months ago by @scadsfct
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1Partial Imaginary Transition State (ITS) Graphs: A Formal Framework for Research and Analysis of Atom-to-Atom Maps of Unbalanced Chemical Reactions and Their Completions
M. González Laffitte, K. Weinbauer, T. Phan, N. Beier, N. Domschke, C. Flamm, T. Gatter, D. Merkle, and P. Stadler. Symmetry, (2024)
2 months ago by @scadsfct
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1Optimisation via encodings: a renormalisation group perspective
K. Klemm, A. Mehta, and P. Stadler. Journal of Physics A: Mathematical and Theoretical, 56 (48): 485001 (2023)
2 months ago by @scadsfct
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1On the Realisability of Chemical Pathways
D. Merkle, and P. Stadler. Bioinformatics Research and Applications: 19th International Symposium, ISBRA 2023, Wrocław, Poland, October 9--12, 2023, Proceedings, 14248, page 409. Springer Nature, (2023)
2 months ago by @scadsfct
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1On the Cut-Vertex and the Interval Transit Functions of Hypergraphs
A. Shanavas, M. Changat, and P. Stadler. Graphs and Combinatorics, 41 (1): 1--26 (2025)
2 months ago by @scadsfct
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1Nesting of Touching Polygons
C. Seemann, P. Stadler, and M. Hellmuth. arXiv preprint arXiv:2409.13040, (2024)
2 months ago by @scadsfct
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1Multiomics reveal unique signatures of human epiploic adipose tissue related to systemic insulin resistance
L. Krieg, K. Didt, I. Karkossa, S. Bernhart, S. Kehr, N. Subramanian, A. Lindhorst, A. Schaudinn, S. Tabei, M. Keller and 1 other author(s). Gut, 71 (11): 2179--2193 (2022)
2 months ago by @scadsfct
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1MuDoGeR: Multi-Domain Genome recovery from metagenomes made easy
U. Rocha, J. Coelho Kasmanas, R. Kallies, J. Saraiva, R. Toscan, P. Stefanic, M. Bicalho, F. Borim Correa, M. Bastürk, E. Fousekis and 1 other author(s). Molecular Ecology Resources, 24 (2): e13904 (2024)
2 months ago by @scadsfct
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1MuDoGeR: Multi-domain genome recovery from metagenomes made easy
U. da Rocha, J. Kasmanas, R. Kallies, J. Saraiva, R. Toscan, P. Stefanic, M. Bicalho, F. Correa, M. Bastürk, E. Fousekis and 1 other author(s). bioRxiv, (2022)
2 months ago by @scadsfct
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1MONSDA: Modular Organizer of Nextflow and Snakemake Driven HTS Data Analysis
J. Fallmann, R. Goldmann, and P. Stadler. (2022)
2 months ago by @scadsfct
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1Mitochondrial genomes in Perkinsus decode conserved frameshifts in all genes
S. Gornik, V. Flores, F. Reinhardt, L. Erber, D. Salas-Leiva, O. Douvropoulou, I. Lassadi, E. Einarsson, M. Mörl, A. Git and 1 other author(s). Molecular biology and evolution, 39 (10): msac191 (2022)
2 months ago by @scadsfct
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