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1A genome-wide scan of wastewater E. coli for genes under positive selection: focusing on mechanisms of antibiotic resistance
N. Malekian, A. Agrawal, T. Berendonk, A. Al-Fatlawi, and M. Schroeder. Scientific Reports, (May 2022)
4 days ago by @scadsfct
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1Word-based GWAS harnesses the rich potential of genomic data for E. coli quinolone resistance
N. Malekian, S. Sainath, A. Al-Fatlawi, and M. Schroeder. Frontiers in Microbiology, (December 2023)
4 days ago by @scadsfct
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1A community effort in SARS‐CoV‐2 drug discovery
J. Schimunek, P. Seidl, K. Elez, T. Hempel, T. Le, F. Noé, S. Olsson, L. Raich, R. Winter, H. Gokcan and 142 other author(s). Molecular Informatics, (November 2023)
4 days ago by @scadsfct
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1An interaction-based drug discovery screen explains known SARS-CoV-2 inhibitors and predicts new compound scaffolds
P. Schake, K. Dishnica, F. Kaiser, C. Leberecht, V. Haupt, and M. Schroeder. Scientific Reports, (June 2023)
4 days ago by @scadsfct
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1Decomposing compounds enables reconstruction of interaction fingerprints for structure-based drug screening
M. Adasme, S. Bolz, A. Al-Fatlawi, and M. Schroeder. Journal of Cheminformatics, (March 2022)
4 days ago by @scadsfct
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1Targeting ion channels with ultra-large library screening for hit discovery
K. Melancon, P. Pliushcheuskaya, J. Meiler, and G. Künze. Frontiers in Molecular Neuroscience, (January 2024)
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1Ferric reduction by a CYBDOM protein counteracts increased iron availability in root meristems induced by phosphorus deficiency
R. Maniero, C. Picco, A. Hartmann, F. Engelberger, A. Gradogna, J. Scholz-Starke, M. Melzer, G. Künze, A. Carpaneto, N. von Wirén and 1 other author(s). Nature Communications, (January 2024)
4 days ago by @scadsfct
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1Similar Binding Modes of cGMP Analogues Limit Selectivity in Modulating Retinal CNG Channels via the Cyclic Nucleotide-Binding Domain
P. Pliushcheuskaya, S. Kesh, E. Kaufmann, S. Wucherpfennig, F. Schwede, G. Künze, and V. Nache. ACS Chemical Neuroscience, 15 (8): 1652–1668 (April 2024)
4 days ago by @scadsfct
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1Structural Studies on the Binding Mode of Bisphenols to PPARγ
A. Useini, I. Schwerin, G. Künze, and N. Sträter. Biomolecules, 14 (6): 640 (May 2024)
4 days ago by @scadsfct
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1The First International Workshop on Open Web Search (WOWS)
S. Farzana, M. Fröbe, M. Granitzer, G. Hendriksen, D. Hiemstra, M. Potthast, and S. Zerhoudi. European Conference on Information Retrieval, page 426--431. Springer, (2024)
4 days ago by @scadsfct
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1Impact and development of an Open Web Index for open web search
M. Granitzer, S. Voigt, N. Fathima, M. Golasowski, C. Guetl, T. Hecking, G. Hendriksen, D. Hiemstra, J. Martinovic, J. Mitrović and 1 other author(s). Journal of the Association for Information Science and Technology, 75 (5): 512--520 (2024)
4 days ago by @scadsfct
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1Systematic Evaluation of Neural Retrieval Models on the Touché 2020 Argument Retrieval Subset of BEIR
N. Thakur, L. Bonifacio, M. Fröbe, A. Bondarenko, E. Kamalloo, M. Potthast, M. Hagen, and J. Lin. Proceedings of the 47th International ACM SIGIR Conference on Research and Development in Information Retrieval, page 1420–1430. ACM, (July 2024)
4 days ago by @scadsfct
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1Report on the Dagstuhl Seminar on Frontiers of Information Access Experimentation for Research and Education
C. Bauer, B. Carterette, N. Ferro, N. Fuhr, J. Beel, T. Breuer, C. Clarke, A. Crescenzi, G. Demartini, G. Di Nunzio and 1 other author(s). ACM SIGIR Forum, 57, page 1--28. ACM New York, NY, USA, (2023)
4 days ago by @scadsfct
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1The Information Retrieval Experiment Platform (Extended Abstract)
M. Fröbe, J. Reimer, S. MacAvaney, N. Deckers, J. Bevendorff, B. Stein, M. Hagen, and M. Potthast. Lernen. Wissen. Daten. Analysen. -- LWDA 2023, page 179--191. CEUR-WS.org, (October 2023)
4 days ago by @scadsfct
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1The Information Retrieval Experiment Platform (Extended Abstract)
M. Fröbe, J. Reimer, S. MacAvaney, N. Deckers, S. Reich, J. Bevendorff, B. Stein, M. Hagen, and M. Potthast. Proceedings of the Thirty-ThirdInternational Joint Conference on Artificial Intelligence, page 8405–8410. International Joint Conferences on Artificial Intelligence Organization, (August 2024)
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1Prototyping Open Web Search Applications with TIRA: A Case Study in Research-oriented Teaching
M. Fröbe, T. Elstner, H. Scells, and M. Potthast. 5th International Symposium on Open Search Technology (OSSYM 2023), International Open Search Symposium, (October 2023)
4 days ago by @scadsfct
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1Open Web Search at LongEval 2023: Reciprocal Rank Fusion on Automatically Generated Query Variants
M. Fröbe, G. Hendriksen, A. de Vries, and M. Potthast. (2023)
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1Overview of Touché 2024: Argumentation Systems
J. Kiesel, {. Cöltekin, M. Heinrich, M. Fröbe, M. Alshomary, B. De Longueville, T. Erjavec, N. Handke, M. Kopp, N. Ljubesić and 1 other author(s). (2024)
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1Overview of PAN 2024: Multi-author Writing Style Analysis, Multilingual Text Detoxification, Oppositional Thinking Analysis, and Generative AI Authorship Verification Condensed Lab Overview
A. Ayele, N. Babakov, J. Bevendorff, X. Casals, B. Chulvi, D. Dementieva, A. Elnagar, D. Freitag, M. Fröbe, D. Korencić and 1 other author(s). International Conference of the Cross-Language Evaluation Forum for European Languages, page 231--259. Springer, (2024)
4 days ago by @scadsfct
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1Resources for Combining Teaching and Research in Information Retrieval Coursework
M. Fröbe, H. Scells, T. Elstner, C. Akiki, L. Gienapp, J. Reimer, S. MacAvaney, B. Stein, M. Hagen, and M. Potthast. Proceedings of the 47th International ACM SIGIR Conference on Research and Development in Information Retrieval, page 1115–1125. ACM, (July 2024)
4 days ago by @scadsfct
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PUMA

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publications (hide)1489
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1A genome-wide scan of wastewater E. coli for genes under positive selection: focusing on mechanisms of antibiotic resistance

1Word-based GWAS harnesses the rich potential of genomic data for E. coli quinolone resistance

1A community effort in SARS‐CoV‐2 drug discovery

1An interaction-based drug discovery screen explains known SARS-CoV-2 inhibitors and predicts new compound scaffolds

1Decomposing compounds enables reconstruction of interaction fingerprints for structure-based drug screening

1Targeting ion channels with ultra-large library screening for hit discovery

1Ferric reduction by a CYBDOM protein counteracts increased iron availability in root meristems induced by phosphorus deficiency

1Similar Binding Modes of cGMP Analogues Limit Selectivity in Modulating Retinal CNG Channels via the Cyclic Nucleotide-Binding Domain

1Structural Studies on the Binding Mode of Bisphenols to PPARγ

1The First International Workshop on Open Web Search (WOWS)

1Impact and development of an Open Web Index for open web search

1Systematic Evaluation of Neural Retrieval Models on the Touché 2020 Argument Retrieval Subset of BEIR

1Report on the Dagstuhl Seminar on Frontiers of Information Access Experimentation for Research and Education

1The Information Retrieval Experiment Platform (Extended Abstract)

1The Information Retrieval Experiment Platform (Extended Abstract)

1Prototyping Open Web Search Applications with TIRA: A Case Study in Research-oriented Teaching

1Open Web Search at LongEval 2023: Reciprocal Rank Fusion on Automatically Generated Query Variants

1Overview of Touché 2024: Argumentation Systems

1Overview of PAN 2024: Multi-author Writing Style Analysis, Multilingual Text Detoxification, Oppositional Thinking Analysis, and Generative AI Authorship Verification Condensed Lab Overview

1Resources for Combining Teaching and Research in Information Retrieval Coursework

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