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publications (hide)1315
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1Concerning Two Classes of Non-Diophantine Arithmetics
M. Caprio, A. Aveni, and S. Mukherjee. 81, page 33. (March 2022)
a month ago by @scadsfct
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1Live and Interactive 3D Photomanipulation under the Microscope using Virtual Reality
J. Tiemann, M. McGinity, I. Sbalzarini, and U. Günther. Extended Abstracts of the 2024 CHI Conference on Human Factors in Computing Systems, New York, NY, USA, Association for Computing Machinery, (2024)
a month ago by @scadsfct
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control,
human-computer
interaction,
microscope
reality,
virtual
visualization
control,human-computerinteraction,microscopereality,virtualvisualization
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1Entropically damped artificial compressibility for the discretization corrected particle strength exchange method in incompressible fluid mechanics
A. Singh, I. Sbalzarini, and A. Obeidat. Computers & Fluids, (December 2023)
a month ago by @scadsfct
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1Standpoint Linear Temporal Logic
N. Gigante, L. Álvarez, and T. Lyon. Proceedings of the 20th International Conference on Principles of Knowledge Representation and Reasoning, page 311--321. IJCAI Inc, (2023)
a month ago by @scadsfct
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1Exploratory Landscape Analysis
P. Kerschke, and M. Preuss. (Jul 24, 2023)
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1Decidable (Ac)counting with Parikh and Muller: Adding Presburger Arithmetic to Monadic Second-Order Logic over Tree-Interpretable Structures
L. Herrmann, V. Peth, and S. Rudolph. 32nd EACSL Annual Conference on Computer Science Logic (CSL 2024), volume 288 of Leibniz International Proceedings in Informatics (LIPIcs), page 33:1--33:19. Dagstuhl, Germany, Schloss Dagstuhl -- Leibniz-Zentrum für Informatik, (2024)
a month ago by @scadsfct
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1Topological and geometric methods with a view towards data analysis
M. Eidi. Universität Leipzig, Dissertation, (2022)
a month ago by @scadsfct
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1Peak-A-Boo! Generating Multi-objective Multiple Peaks Benchmark Problems with Precise Pareto Sets
L. Schäpermeier, P. Kerschke, C. Grimme, and H. Trautmann. Evolutionary Multi-Criterion Optimization, page 291--304. Germany, Springer, (2023)Publisher Copyright: © 2023, The Author(s), under exclusive license to Springer Nature Switzerland AG.; 12th International Conference on Evolutionary Multi-Criterion Optimization, EMO 2023, EMO ; Conference date: 20-03-2023 Through 24-03-2023.
a month ago by @scadsfct
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Benchmarking
Multi-objective_optimization
Multimodal_optimization
Numeric_optimization
Problem_generator
n/a_OA_procedure
BenchmarkingMulti-objective_optimizationMultimodal_optimizationNumeric_optimizationProblem_generatorn/a_OA_procedure
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1Mono-valent salt corrections for RNA secondary structures in the ViennaRNA package
H. Yao, R. Lorenz, I. Hofacker, and P. Stadler. Algorithms for Molecular Biology, 18 (1): 8 (July 2023)
a month ago by @scadsfct
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1Pushing the Boundaries of Tractable Multiperspective Reasoning: A Deduction Calculus for Standpoint EL+
L. Álvarez, S. Rudolph, and H. Straß. Proceedings of the 20th International Conference on Principles of Knowledge Representation and Reasoning, page 333--343. IJCAI Inc, (2023)
a month ago by @scadsfct
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1Mathematical principles of topological and geometric data analysis
P. Joharinad, and J. Jost. Mathematics of data Springer, Cham, (2023)
a month ago by @scadsfct
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1Irreducibility of Markov Chains on simplicial complexes, the Spectrum of the Discrete Hodge Laplacian and Homology
M. Eidi, and S. Mukherjee. (2023)
a month ago by @scadsfct
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1Manipulating base quality scores enables variant calling from bisulfite sequencing alignments using conventional bayesian approaches
A. Nunn, C. Otto, M. Fasold, P. Stadler, and D. Langenberger. BMC Genomics, 23 (1): 477 (June 2022)
a month ago by @scadsfct
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1Querying Circumscribed Description Logic Knowledge Bases (Extended Abstract)
C. Lutz, Q. Manière, and R. Nolte. Proceedings of the 36th International Workshop on Description Logics (DL 2023) co-located with the 20th International Conference on Principles of Knowledge Representation and Reasoning and the 21st International Workshop on Non-Monotonic Reasoning (KR 2023 and NMR 2023)., Rhodes, Greece, September 2-4, 2023, volume 3515 of CEUR Workshop Proceedings, CEUR-WS.org, (2023)
a month ago by @scadsfct
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1Robustness for Spectral Clustering of General Graphs under Local Differential Privacy
S. Mukherjee, and V. Suppakitpaisarn. (2023)
a month ago by @scadsfct
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1Gibbs posterior convergence and the thermodynamic formalism
K. McGoff, S. Mukherjee, and A. Nobel. (2019)
a month ago by @scadsfct
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1Ergodic Theorems for Dynamic Imprecise Probability Kinematics
M. Caprio, and S. Mukherjee. (2022)
a month ago by @scadsfct
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1A Comparative Analysis of Community Detection Algorithms on Artificial Networks
Z. Yang, R. Algesheimer, and C. Tessone. Scientific Reports, (August 2016)
a month ago by @scadsfct
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1Reinvestigating the R2 Indicator: Achieving Pareto Compliance by Integration
L. Schäpermeier, and P. Kerschke. (2024)
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1A high-order fully Lagrangian particle level-set method for dynamic surfaces
L. Schulze, S. Veettil, and I. Sbalzarini. CoRR, (2023)
25 days ago by @scadsfct
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1Chapter 5 - Artificial intelligence (AI) enhanced nanomotors and active matter
F. Cichos, S. Landin, and R. Pradip. Intelligent Nanotechnology, Elsevier, (2023)
25 days ago by @scadsfct
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Active
Feedback
Machine
Multi
Optical
Reinforcement
agent
control
control,
learning,
particles,
reinforcement
ActiveFeedbackMachineMultiOpticalReinforcementagentcontrolcontrol,learning,particles,reinforcement
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1Roadmap on Deep Learning for Microscopy
G. Volpe, C. W�hlby, L. Tian, M. Hecht, A. Yakimovich, K. Monakhova, L. Waller, I. Sbalzarini, C. Metzler, M. Xie and 65 other author(s). (2023)
25 days ago by @scadsfct
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1Proven Distributed Memory Parallelization of Particle Methods
J. Pahlke, and I. Sbalzarini. (Sep 18, 2024)
25 days ago by @scadsfct
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algorithmics,
algorithms,
bounds,
definition,
distributed
engineering
formal
memory,
meshfree
methods,
parallelization,
particle
scalability
simulation
software
algorithmics,algorithms,bounds,definition,distributedengineeringformalmemory,meshfreemethods,parallelization,particlescalabilitysimulationsoftware
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1Stability selection enables robust learning of partial differential equations from limited noisy data
S. Maddu, B. Cheeseman, I. Sbalzarini, and C. Müller. (2019)
25 days ago by @scadsfct
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(cs.LG),
(math.NA),
(physics.data-an),
Analysis
Analysis,
Computer
Data
FOS:
Learning
Machine
Mathematics,
Numerical
Physical
Probability
Statistics
and
information
sciences
sciences,
(cs.LG),(math.NA),(physics.data-an),AnalysisAnalysis,ComputerDataFOS:LearningMachineMathematics,NumericalPhysicalProbabilityStatisticsandinformationsciencessciences,
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1A Gaussian jump process formulation of the reaction�diffusion master equation enables faster exact stochastic simulations
T. Subic, and I. Sbalzarini. The Journal of Chemical Physics, (November 2022)
25 days ago by @scadsfct
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1Benchmarking Large Language Models for Bio-Image Analysis Code Generation
R. Haase, C. Tischer, J. H�rich�, and N. Scherf. (April 2024)
25 days ago by @scadsfct
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1Variational inference accelerates accurate DNA mixture deconvolution
M. Susik, and I. Sbalzarini. Forensic Science International: Genetics, (July 2023)
25 days ago by @scadsfct
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1Quantifying Molecular Dynamics within Complex Cellular Morphologies using LLSM?FRAP (Small Methods 6/2022)
H. Colin?York, J. Heddleston, E. Wait, N. Karedla, M. deSantis, S. Khuon, T. Chew, I. Sbalzarini, and M. Fritzsche. Small Methods, (June 2022)
25 days ago by @scadsfct
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1Adaptive weighting of Bayesian physics informed neural networks for multitask and multiscale forward and inverse problems
S. Perez, S. Maddu, I. Sbalzarini, and P. Poncet. J. Comput. Phys., (2023)
25 days ago by @scadsfct
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1Hamiltonian Monte Carlo with strict convergence criteria reduces run-to-run variability in forensic DNA mixture deconvolution
M. Susik, H. Schönborn, and I. Sbalzarini. Forensic Science International: Genetics, (September 2022)
25 days ago by @scadsfct
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1Analysis of the Hamiltonian Monte Carlo genotyping algorithm on PROVEDIt mixtures including a novel precision benchmark
M. Susik, and I. Sbalzarini. Forensic Science International: Genetics, (2023)
25 days ago by @scadsfct
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DNA
HMC
Probabilistic
Validation,
genotyping,
mixtures,
DNAHMCProbabilisticValidation,genotyping,mixtures,
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1Efficient Raycasting of Volumetric Depth Images for Remote Visualization of Large Volumes at High Frame Rates
A. Gupta, U. Günther, P. Incardona, G. Reina, S. Frey, S. Gumhold, and I. Sbalzarini. 2023 IEEE 16th Pacific Visualization Symposium (PacificVis), 19, page 61�70. IEEE, (April 2023)
25 days ago by @scadsfct
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1Model-based autotuning of discretization methods in numerical simulations of partial differential equations
N. Khouzami, F. Michel, P. Incardona, J. Castrillon, and I. Sbalzarini. Journal of Computational Science, (January 2022)
25 days ago by @scadsfct
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1A numerical solver for active hydrodynamics in three dimensions and its application to active turbulence
A. Singh, P. Suhrcke, P. Incardona, and I. Sbalzarini. Physics of Fluids, (October 2023)
25 days ago by @scadsfct
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1Open Problem: Active Representation Learning
N. Milosevic, G. M�ller, J. Huisken, and N. Scherf. (2024)
25 days ago by @scadsfct
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1Spontaneous flow instabilities of active polar fluids in three dimensions
A. Singh, Q. Vagne, F. Jülicher, and I. Sbalzarini. Phys. Rev. Res., 5 (2): L022061 (June 2023)
25 days ago by @scadsfct
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1A Distributed Algebra System for Time Integration on Parallel Computers
A. Singh, L. Kraatz, P. Incardona, and I. Sbalzarini. CoRR, (2023)
25 days ago by @scadsfct
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1A portable C++ library for memory and compute abstraction on multi?core CPUs and GPUs
P. Incardona, A. Gupta, S. Yaskovets, and I. Sbalzarini. Concurrency and Computation: Practice and Experience, (July 2023)
25 days ago by @scadsfct
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1Revealing the learning process in reinforcement learning agents through attention-oriented metrics
C. Beylier, S. Hofmann, and N. Scherf. (2024)
25 days ago by @scadsfct
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1Collective cell migration during optic cup formation features changing cell-matrix interactions linked to matrix topology
K. Soans, A. Ramos, J. Sidhaye, A. Krishna, A. Solomatina, K. Hoffmann, R. Schl��ler, J. Guck, I. Sbalzarini, C. Modes and 1 other author(s). Current Biology, 32 (22): 4817--4831.e9 (2022)
25 days ago by @scadsfct
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cell
collective
cup,
matrix
migration,
optic
simulation
topology
topology,
zebrafish,
cellcollectivecup,matrixmigration,opticsimulationtopologytopology,zebrafish,
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1STENCIL-NET for equation-free forecasting from data
S. Maddu, D. Sturm, B. Cheeseman, C. Müller, and I. Sbalzarini. Scientific Reports, (August 2023)
25 days ago by @scadsfct
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1Computational Power of Particle Methods
J. Pahlke, and I. Sbalzarini. CoRR, (2023)
25 days ago by @scadsfct
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1Learning locally dominant force balances in active particle systems
D. Sturm, S. Maddu, and I. Sbalzarini. CoRR, (2023)
25 days ago by @scadsfct
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1Improving Estimation for Asymptotically Independent Bivariate Extremes via Global Estimators for the Angular Dependence Function
C. Murphy-Barltrop, J. Wadsworth, and E. Eastoe. Extremes, (Aug 13, 2024)
24 days ago by @scadsfct
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2The SPAR Model: A New Paradigm for Multivariate Extremes: Application to Joint Distributions of Metocean Variables
E. Mackay, C. Murphy-Barltrop, and P. Jonathan. Journal of Offshore Mechanics and Arctic Engineering, (July 2024)
24 days ago by @scadsfct
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2Modelling Non-Stationarity in Asymptotically Independent Extremes
C. Murphy-Barltrop, and J. Wadsworth. Computational Statistics and Data Analysis, (November 2024)
24 days ago by @scadsfct
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2Logics with Concrete Domains: First-Order Properties, Abstract Expressive Power, and (Un)Decidability
F. Baader, and F. De Bortoli. SIGAPP Appl. Comput. Rev., 24 (3): 5–17 (Oct 8, 2024)
24 days ago by @scadsfct
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2The Precise Complexity of Reasoning in $ALC$ with $ømega$-Admissible Concrete Domains (Extended Version)
S. Borgwardt, F. Bortoli, and P. Koopmann. (2024)
24 days ago by @scadsfct
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2SetQuence & SetOmic: Deep Set Transformers for Whole Genome and Exome Tumour Analysis
N. Jurenaite, D. León-Periñán, V. Donath, S. Torge, and R. Jäkel. BioSystems, (January 2024)
17 days ago by @scadsfct
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topic_lifescience
topic_lifescience
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2SetQuence & SetOmic: Deep Set Transformer-based Representations of Cancer Multi-Omics
N. Jurenaite, D. León-Periñán, V. Donath, S. Torge, and R. Jäkel. 2022 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB), page 1-9. (August 2022)
17 days ago by @scadsfct
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