Arctic Climate Response to European Radiative Forcing: A Deep Learning Approach. EGUsphere, (2024):1-55, Copernicus Publications, 2024. [PUMA: Yaff topic_earthenvironment]
Identification of correlation between residential water demand and average income using the pool regression model: Study case in Fortaleza-Brazil. Water Utility Journal, 2020. [PUMA: zno]
Variational Mode Decomposition Hybridized With Gradient Boost Regression for Seasonal Forecast of Residential Water Demand. Water Resources Management, (35)10:3431-3445, Springer Netherlands, 2021. [PUMA: zno]
Integrated proactive drought management in hydrosystems and cities: building a nine-step participatory planning methodology. Natural Hazards: Journal of the International Society for the Prevention and Mitigation of Natural Hazards, (115)3:2179-2204, Springer & International Society for the Prevention and Mitigation of Natural Hazards, 2023. [PUMA: zno]
From insufficient rainfall to livelihoods: understanding the cascade of drought impacts and policy implications. EGUsphere, (2024):1-20, Copernicus Publications, 2024. [PUMA: zno]
Leveraging surface observations and passive satellite retrievals of cloud properties: Applications to cloud type classification and cloud base height retrieval. EGU24-18214Copernicus Meetings, 2024. [PUMA: yaff]
CloudViT: classifying cloud types in global satellite data and in kilometre-resolution simulations using vision transformers. EGUsphere, (2024):1-31, Copernicus Publications, 2024. [PUMA: yaff]
ALAS: Active Learning for Autoconversion Rates Prediction from Satellite Data. 3358-3366, PMLR, 2024. [PUMA: Yaff]
A Physics-informed Deep Learning Based Clustering to Investigate the Impact of Regional European Radiative Forcing on Arctic Climate and Upper Atmospheric Dynamics. EGU24-16391Copernicus Meetings, 2024. [PUMA: yaff]
Macrophenological dynamics from citizen science plant occurrence data. Methods in Ecology and Evolution, (15)8:1422–1437, Wiley, July 2024. [PUMA: Yaff] URL
From simple labels to semantic image segmentation: leveraging citizen science plant photographs for tree species mapping in drone imagery. Biogeosciences, (21)11:2909–2935, Copernicus GmbH, June 2024. [PUMA: xack] URL
On-Demand Earth System Data Cubes. IGARSS 2024 - 2024 IEEE International Geoscience and Remote Sensing Symposium, 7529–7532, IEEE, July 2024. [PUMA: zno] URL
Citizen science plant observations encode global trait patterns. Nature Ecology & Evolution, (6)12:1850–1859, Springer Science and Business Media LLC, October 2022. [PUMA: zno] URL
Biodiversity and Climate Extremes: Known Interactions and Research Gaps. Earth’s Future, (12)6American Geophysical Union (AGU), June 2024. [PUMA: zno] URL
Lexcube: Interactive Visualization of Large Earth System Data Cubes. IEEE Computer Graphics and Applications, (44)1:25–37, Institute of Electrical and Electronics Engineers (IEEE), January 2024. [PUMA: zno] URL
Text mining uncovers the unique dynamics of socio-economic impacts of the 2018–2022 multi-year drought in Germany. Natural Hazards and Earth System Sciences, (24)5:1757–1777, Copernicus GmbH, May 2024. [PUMA: Zno] URL
Estimating transpiration globally by integrating the Priestley-Taylor model with neural networks. Environ. Res. Lett., (19)11:114089, IOP Publishing, November 2024. [PUMA: zno]
Explainable Earth Surface Forecasting under Extreme Events. arXiv, 2024. [PUMA: zno] URL
Temporal dynamics in vertical leaf angles can confound vegetation indices widely used in Earth observations. Communications Earth & Environment, (5)1Springer Science and Business Media LLC, October 2024. [PUMA: zno] URL
How Interpretable Machine Learning Can Benefit Process Understanding in the Geosciences. Earth’s Future, (12)7American Geophysical Union (AGU), July 2024. [PUMA: yaff] URL
Simulation-based inference as a paradigm for scientific machine learning in the cryosphere and beyond. Copernicus GmbH, March 2024. [PUMA: zno] URL
A new climate impact database using generative AI. Copernicus GmbH, November 2024. [PUMA: zno] URL
Technical Note: The divide and measure nonconformity – how metrics can mislead when we evaluate on different data partitions. Hydrology and Earth System Sciences, (28)15:3665–3673, Copernicus GmbH, August 2024. [PUMA: zno] URL
Identifying compound weather drivers of forest biomass loss with generative deep learning. Environmental Data Science, (3)Cambridge University Press (CUP), 2024. [PUMA: zno] URL
Using LLMs to Build a Database of Climate Extreme Impacts. Proceedings of the 1st Workshop on Natural Language Processing Meets Climate Change (ClimateNLP 2024), 93–110, Association for Computational Linguistics, 2024. [PUMA: imported zno] URL
Assessing Data Usefulness for Failure Analysis in Anonymized System Logs. Proceedings of the 17th International Symposium on Parallel and Distributed Computing (ISPDC), 164--171, Geneva, Switzerland, June 2018. [PUMA: zno]
A generalized and versatile framework to train and evaluate autoencoders for biological representation learning and beyond: AUTOENCODIX. bioRxiv, Cold Spring Harbor Laboratory, December 2024. [PUMA: xack] URL
Evolution and Phylogeny of MicroRNAs — Protocols, Pitfalls, and Problems. miRNomics, 211–233, Springer US, February 2012. [PUMA: Evolution MicroRNAs Phylogeny Zno] URL
DeepExtremeCubes: Earth system spatio-temporal data for assessing compound heatwave and drought impacts. Scientific Data, (12)1:149, Jan 25, 2025. [PUMA: Yaff topic_earthenvironment] URL
Specialized signaling centers direct cell fate and spatial organization in a limb organoid model. bioRxiv, Cold Spring Harbor Laboratory, 2024. [PUMA: ML_Spatial_Understanding Zno] URL
Morpho-molecular features of Epithelial Mesenchymal Transition associate with clinical outcome in patients with rectal cancer. bioRxiv, 2024--11, Cold Spring Harbor Laboratory, 2024. [PUMA: ML_Spatial_Understanding Yaff]
CoNIC Challenge: Pushing the Frontiers of Nuclear Detection, Segmentation, Classification and Counting. arXiv preprint arXiv:2303.06274, (92):103047, 2023. [PUMA: Computational_pathology Deep_learning ML_Spatial_Understanding Nuclear_recognition Zno] URL
Modular segmentation, spatial analysis and visualization of volume electron microscopy datasets. Nature Protocols, 1--31, Nature Publishing Group UK London, 2024. [PUMA: ML_Spatial_Understanding Zno]
Trackastra: Transformer-based cell tracking for live-cell microscopy. European Conference on Computer Vision, 467--484, 2025. [PUMA: ML_Spatial_Understanding imported]
HW-GPT-Bench: Hardware-Aware Architecture Benchmark for Language Models. The Thirty-eight Conference on Neural Information Processing Systems Datasets and Benchmarks Track (NeurIPS'24), 2024. [PUMA: AutoML Xack Yaff large_language_models neural_architecture_search]
Single-cell transcriptomics and epigenomics point to CD58-CD2 interaction in controlling primary melanoma growth and immunity. Cancer Communications, (n/a)n/aJohn Wiley & Sons, Ltd, January 2025. [PUMA: Yaff melanoma myown single-cell topic_lifescience transcriptomics] URL
Control of lumen geometry and topology by the interplay between pressure and cell proliferation rate in pancreatic organoids. bioRxiv, Cold Spring Harbor Laboratory, 2024. [PUMA: Yaff imported] URL
Advancing Sustainable IoT Appliance Load Monitoring Through Edge-Enabled Federated Transfer Learning. 2024 International Conference on Green Energy, Computing and Sustainable Technology (GECOST), 386-391, January 2024. [PUMA: Yaff imported]
AI Development in Germany After the Publication of German Nation AI Strategy, Problems and Solutions. Journal of Humanities and Education Development, (6)5:68–81, AI Publications, 2024. [PUMA: Zno imported] URL
Artificial intelligence hallucinations in anaesthesia: Causes, consequences and countermeasures. Indian Journal of Anaesthesia, (68)7:658–661, Medknow, June 2024. [PUMA: Zno imported] URL
Klangwelten neu gedacht : Zur Nutzung und Rolle von Künstlicher Intelligenz in der Musikproduktion. Universitäts- und Landesbibliothek Sachsen-Anhalt, 2024. [PUMA: Zno imported] URL
Sex differences in vaccine induced immunity and protection againstMycobacterium tuberculosis. Cold Spring Harbor Laboratory, April 2024. [PUMA: Yaff imported] URL
On the Limitations of Embedding Based Methods for Measuring Functional Correctness for Code Generation. 2024. [PUMA: Zno imported] URL
No Dimensional Sampling Coresets for Classification. 2024. [PUMA: Yaff imported] URL
Geometric separability of mesoscale patterns in embedding representation and visualization of multidimensional data and complex networks. PLOS Complex Systems, (1)2:1-28, Public Library of Science, October 2024. [PUMA: Yaff imported] URL
LIPIcs, Volume 299, FSCD 2024, Complete Volume. Schloss Dagstuhl – Leibniz-Zentrum für Informatik, 2024. [PUMA: Xack Yaff imported] URL
16P The role of systemic immunity in locally advanced gastric cancer patients treated with neoadjuvant chemotherapy. ESMO Open, (9):103762, 2024. [PUMA: Yaff imported] URL
2024 ESA-ECMWF workshop report: current status, progress and opportunities in machine learning for Earth system observation and prediction. npj Climate and Atmospheric Science, (7)1:241, Oct 9, 2024. [PUMA: Zno imported] URL
A Benchmark for Virus Infection Reporter Virtual Staining in Fluorescence and Brightfield Microscopy. Cold Spring Harbor Laboratory, September 2024. [PUMA: Xack imported] URL
A deep learning dataset for sample preparation artefacts detection in multispectral high-content microscopy. Scientific Data, (11)1:232, Feb 23, 2024. [PUMA: Xack imported] URL
Analyzing impact cascades: an integrative approach for assessing the interconnected effects of extreme events across sectors and systems. EGU General Assembly Conference Abstracts, 1496, April 2024. [PUMA: Yaff imported]
A note on girth-diameter cages. 2024. [PUMA: Yaff imported] URL
Asymptotic Uncertainty in the Estimation of Frequency Domain Causal Effects for Linear Processes. 2024. [PUMA: Yaff imported] URL
AutoRDF2GML: Facilitating RDF Integration in Graph Machine Learning. In Gianluca Demartini, Katja Hose, Maribel Acosta, Matteo Palmonari, Gong Cheng, Hala Skaf-Molli, Nicolas Ferranti, Daniel Hernández, and Aidan Hogan (Eds.), The Semantic Web -- ISWC 2024, 115--133, Springer Nature Switzerland, Cham, 2025. [PUMA: Yaff imported]
Beyond Boundaries: A Human-like Approach for Question Answering over Structured and Unstructured Information Sources. Transactions of the Association for Computational Linguistics, (12):786--802, MIT Press, Cambridge, MA, 2024. [PUMA: Yaff imported] URL
Streaming Data in HPC Workflows Using ADIOS. 2024. [PUMA: Zno imported] URL
Enabling High- Throughput Parallel I/O in Particle-in-Cell Monte Carlo Simulations with openPMD and Darshan I/O Monitoring. 2024 IEEE International Conference on Cluster Computing Workshops (CLUSTER Workshops), 86-95, September 2024. [PUMA: Zno imported]
Advancing oncology with federated learning: transcending boundaries in breast, lung, and prostate cancer. A systematic review. 2024. [PUMA: Zno imported] URL
Live Iterative Ptychography. Microscopy and Microanalysis, (30)1:103–117, Oxford University Press (OUP), February 2024. [PUMA: Iterative Live Ptychography Zno imported] URL
Survivorship Data in Prostate Cancer: Where Are We and Where Do We Need To Be?. European Urology Open Science, (59):27–29, Elsevier BV, January 2024. [PUMA: Cancer: Data Prostate Survivorship Zno imported] URL
EZ: An efficient, charge conserving current deposition algorithm for electromagnetic particle-in-cell simulations. Computer Physics Communications, (291):108849, 2023. [PUMA: Charge Current EZ PIConGPU Particle-in-cell Zno conservation deposition imported] URL
Application Experiences on a GPU-Accelerated Arm-based HPC Testbed. Proceedings of the HPC Asia 2023 Workshops, 35–49, Association for Computing Machinery, New York, NY, USA, 2023. [PUMA: Zno imported] URL
Learning Electron Bunch Distribution along a FEL Beamline by Normalising Flows. 2023. [PUMA: Bunch Distribution Electron Learning Zno imported] URL
Atomic population kinetics for Particle in Cell. 2023. [PUMA: Atomic Zno imported kinetics population]
AI-Augmented Facilities: Bridging Experiment and Simulation with ML (Dagstuhl Seminar 23132). Schloss Dagstuhl – Leibniz-Zentrum für Informatik, 2023. [PUMA: AI-Augmented Facilities Zno imported] URL
LLAMA: The low‐level abstraction for memory access. Software: Practice and Experience, (53)1:115–141, Wiley, March 2022. [PUMA: LLAMA Zno access imported memory] URL
Continual learning autoencoder training for a particle-in-cell simulation via streaming. 2022. [PUMA: Continual Zno autoencoder imported learning particle-in-cell simulation training] URL
917P OPTIMA: Improve care for patients with prostate, breast, and lung cancer through artificial intelligence. Annals of Oncology, (33):S966, Elsevier BV, September 2022. [PUMA: 917P OPTIMA Zno imported] URL
Accelerator Programming Using Directives: 8th International Workshop, WACCPD 2021, Virtual Event, November 14, 2021, Proceedings. In Sridutt Bhalachandra, Christopher Daley, and Verónica Melesse Vergara (Eds.), Springer-Verlag, Berlin, Heidelberg, 2021. [PUMA: 2021 Accelerator Programming WACCPD Zno imported]
Evaluating GPU Programming Models for the LUMI Supercomputer. 79-101, January 2022. [PUMA: GPU LUMI Programming Supercomputer Zno]
Early application experiences on a modern GPU-accelerated Arm-based HPC platform. HPC Asia, (23)2022. [PUMA: Arm-based Early GPU-accelerated HPC Zno application experiences modern platform]
A Decade of Shared Tasks in Digital Text Forensics at PAN. In Leif Azzopardi, Benno Stein, Norbert Fuhr, Philipp Mayr, Claudia Hauff, and Djoerd Hiemstra (Eds.), Advances in Information Retrieval. 41st European Conference on IR Research (ECIR 2019), (11438):291--300, Springer, Berlin Heidelberg New York, April 2019. [PUMA: Decade Digital Forensics PAN Shared Tasks Text Zno]
A Dataset for Content Error Detection in Web Archives. In Maria Bonn, Stephen J. Downie, Alain Martaus, and Dan Wu (Eds.), 18th ACM/IEEE Joint Conference on Digital Libraries (JCDL 2019), 349--350, ACM, June 2019. [PUMA: Archives Content Dataset Detection Error Web Zno]
Argument Search: Assessing Argument Relevance. 42nd International ACM Conference on Research and Development in Information Retrieval (SIGIR 2019), ACM, July 2019. [PUMA: Argument Assessing Relevance Search Zno]
Overview of the Style Change Detection Task at PAN 2019. In Linda Cappellato, Nicola Ferro, David E. Losada, and Henning Müller (Eds.), Working Notes Papers of the CLEF 2019 Evaluation Labs, (2380)September 2019. [PUMA: 2019 Change Detection Overview PAN Style Task Zno] URL
The Importance of Suppressing Domain Style in Authorship Analysis. CoRR, (abs/2005.14714)May 2020. [PUMA: Analysis Authorship Domain Importance Style Suppressing Zno] URL
Web Page Segmentation Revisited: Evaluation Framework and Dataset. In Mathieu d'Aquin, Stefan Dietze, Claudia Hauff, Edward Curry, and Philippe Cudré-Mauroux (Eds.), 29th ACM International Conference on Information and Knowledge Management (CIKM 2020), 3047--3054, ACM, October 2020. [PUMA: Dataset Evaluation Framework Page Revisited Segmentation Web Zno]
Web Archive Analytics: Infrastructure & Applications @ Webis (extended abstract). In Andreas Wagner, Christian Guetl, Michael Granitzer, and Stefan Voigt (Eds.), 2nd International Symposium on Open Search Technology (OSSYM 2020), International Open Search Symposium, October 2020. [PUMA: Analytics Applications Archive Infrastructure Web Webis Zno]
Task Proposal: Abstractive Snippet Generation for Web Pages. 13th International Conference on Natural Language Generation (INLG 2020), 237--241, Association for Computational Linguistics, December 2020. [PUMA: Abstractive Generation Pages Proposal Snippet Task Web Zno] URL
43rd International Conference on IR Research (ECIR 2021). In Djoerd Hiemstra, Marie-Francine Moens, Josiane Mothe, Raffaele Perego, Martin Potthast, and Fabrizio Sebastiani (Eds.), Lecture Notes in Computer Science, (12656)Springer, Berlin Heidelberg New York, April 2021. [PUMA: 2021 43rd Conference ECIR IR International Research Zno]
When a social network writes science history: How Wikipedia frames innovation processes. Framing Innovation in a Networked World. An Interdisciplinary Workshop, September 2021. [PUMA: Wikipedia Zno history innovation network processes science social] URL
SUMMARY EXPLORER: Visualizing the State of the Art in Text Summarization. In Marie-Francine Moens, Xuanjing Huang, Lucia Specia, and Scott Wen-tau Yih (Eds.), 26th Conference on Empirical Methods in Natural Language Processing (EMNLP 2021), 185--194, Association for Computational Linguistics, November 2021. [PUMA: EXPLORER SUMMARY Summarization Text Visualizing Xack]
Key Point Analysis via Contrastive Learning and Extractive Argument Summarization. In Khalid Al-Khatib, Yufang Hou, and Manfred Stede (Eds.), 8th Workshop on Argument Mining (ArgMining 2021) at EMNLP, 184--189, Association for Computational Linguistics, November 2021. [PUMA: Analysis Argument Contrastive Extractive Key Learning Point Summarization Zno]
Weighted complexes, cohomology and Laplace operators. Mathematical Principles of Topological and Geometric Data Analysis, 2:65--81, Springer International Publishing, Cham, 2023. [PUMA: Laplace Weighted Xack Yaff cohomology complexes operators]
Vom Wurstessen zur Revolution?. Pastoraltheologie, (112)1:44--56, Brill Deutschland GmbH, January 2023. [PUMA: Menschen Selbstbefreiung Yaff]
Visualization in the Wild. IEEE Comput. Graph. Appl., (43)6:46--49, Institute of Electrical and Electronics Engineers (IEEE), November 2023. [PUMA: Visualization Xack]
Virtual reality and computational efficiency. SpringerBriefs in Earth System Sciences, 77--89, Springer Nature Switzerland, Cham, 2023. [PUMA: Virtual Yaff computational efficiency reality]
Utilizing transformers on OCT imagery and metadata for treatment response prediction in macular edema patients. Lecture Notes in Computer Science, 3--15, Springer Nature Switzerland, Cham, 2023. [PUMA: OCT Xack edema macular prediction response topic_lifescience transformers treatment]
Unsupervised feature selection based on variance–covariance subspace distance. Neural Networks, (166):188-203, 2023. [PUMA: Feature Regularization Subspace Xack distance learning selection] URL
Universal gut microbial relationships in the gut microbiome of wild baboons. Elife, (12)eLife Sciences Publications, Ltd, May 2023. [PUMA: Zno bacteria between community correlations cynocephalus data disease dynamics ecology gut infectious longitudinal microbiology microbiome microbiota personalization universality] URL
Understanding metric-related pitfalls in image analysis validation. Nat. Methods, (21)2:182--194, Springer Science and Business Media LLC, February 2024. [PUMA: Zno analysis image pitfalls validation]
Tverberg Partition Graphs. 2023. [PUMA: Graphs Partition Tverberg Yaff]
Treating role assertions as first-class citizens in repair and error-tolerant reasoning. Proceedings of the 38th ACM/SIGAPP Symposium on Applied Computing, 974--982, ACM, New York, NY, USA, March 2023. [PUMA: Xack assertions citizens error-tolerant first-class reasoning repair role]
Transferable interatomic potential for aluminum from ambient conditions to warm dense matter. Phys. Rev. Res., (5)3American Physical Society (APS), September 2023. [PUMA: Transferable Xack aluminum ambient conditions interatomic potential]
Towards more credible models in catchment hydrology to enhance hydrological process understanding: Preface. Authorea, Inc., September 2023. [PUMA: Yaff catchment credible hydrological hydrology models process]
Topological foundations, hypercomplexes and homology. Mathematics of Data, 15--64, Springer International Publishing, Cham, 2023. [PUMA: Topological foundations homology hypercomplexes]
Thirty-three myths and misconceptions about population data: from data capture and processing to linkage. Int. J. Popul. Data Sci., (8)1:2115, Swansea University, January 2023. [PUMA: Xack administrative data editing errors linkage personal quality record]
The Laplace operator and the geometry of graphs. Mathematics of Data, 83--113, Springer International Publishing, Cham, 2023. [PUMA: Laplace geometry graphs operator]
The human genome's vocabulary as proposed by the DNA language model GROVER. bioRxiv, July 2023. [PUMA: DNA GROVER Xack language model]
Surfaces in The Tesseract. 2023. [PUMA: Surfaces Tesseract Yaff]