Publications

Diego Del Alamo, Axel W Fischer, Rocco Moretti, Nathan S Alexander, Jeffrey Mendenhall, Nicholas J Hyman, and Jens Meiler. Efficient sampling of protein loop regions using conformational hashing complemented with random coordinate descent. J. Chem. Theory Comput., (17)1:560--570, American Chemical Society (ACS), January 2021. [PUMA: topic_lifescience]

Titus J Brinker, Max Schmitt, Eva I Krieghoff-Henning, Raymond Barnhill, Helmut Beltraminelli, Stephan A Braun, Richard Carr, Maria-Teresa Fernandez-Figueras, Gerardo Ferrara, Sylvie Fraitag, Raffaele Gianotti, Mar Llamas-Velasco, Cornelia S L Müller, Antonio Perasole, Luis Requena, Omar P Sangueza, Carlos Santonja, Hans Starz, Esmeralda Vale, Wolfgang Weyers, Achim Hekler, Jakob N Kather, Stefan Fröhling, Dieter Krahl, Tim Holland-Letz, Jochen S Utikal, Andrea Saggini, and Heinz Kutzner. Diagnostic performance of artificial intelligence for histologic melanoma recognition compared to 18 international expert pathologists. J. Am. Acad. Dermatol., (86)3:640--642, Elsevier BV, March 2022. [PUMA: topic_lifescience]

Nina G Bozhanova, Andrew I Flyak, Benjamin P Brown, Stormy E Ruiz, Jordan Salas, Semi Rho, Robin G Bombardi, Luke Myers, Cinque Soto, Justin R Bailey, James E Crowe, Jr, Pamela J Bjorkman, and Jens Meiler. Computational identification of HCV neutralizing antibodies with a common HCDR3 disulfide bond motif in the antibody repertoires of infected individuals. Nat. Commun., (13)1:3178, Springer Science and Business Media LLC, June 2022. [PUMA: topic_lifescience]

Atia Bano Memon, Kyrill Meyer, Michael Thieme, and Lars-Peter Meyer. Inter-InnoLab collaboration: An investigation of the diversity and interconnection among Innovation Laboratories. J. Eng. Technol. Manag., (47):1--21, Elsevier BV, January 2018. [PUMA: topic_lifescience]

Claudia L Satizabal, Hieab H H Adams, Derrek P Hibar, Charles C White, Maria J Knol, Jason L Stein, Markus Scholz, Muralidharan Sargurupremraj, Neda Jahanshad, Gennady V Roshchupkin, Albert V Smith, Joshua C Bis, Xueqiu Jian, Michelle Luciano, Edith Hofer, Alexander Teumer, Sven J van der Lee, Jingyun Yang, Lisa R Yanek, Tom V Lee, Shuo Li, Yanhui Hu, Jia Yu Koh, John D Eicher, Sylvane Desrivières, Alejandro Arias-Vasquez, Ganesh Chauhan, Lavinia Athanasiu, Miguel E Renter\'ıa, Sungeun Kim, David Hoehn, Nicola J Armstrong, Qiang Chen, Avram J Holmes, Anouk den Braber, Iwona Kloszewska, Micael Andersson, Thomas Espeseth, Oliver Grimm, Lucija Abramovic, Saud Alhusaini, Yuri Milaneschi, Martina Papmeyer, Tomas Axelsson, Stefan Ehrlich, Roberto Roiz-Santiañez, Bernd Kraemer, Asta K H\aaberg, Hannah J Jones, G Bruce Pike, Dan J Stein, Allison Stevens, Janita Bralten, Meike W Vernooij, Tamara B Harris, Irina Filippi, A Veronica Witte, Tulio Guadalupe, Katharina Wittfeld, Thomas H Mosley, James T Becker, Nhat Trung Doan, Saskia P Hagenaars, Yasaman Saba, Gabriel Cuellar-Partida, Najaf Amin, Saima Hilal, Kwangsik Nho, Nazanin Mirza-Schreiber, Konstantinos Arfanakis, Diane M Becker, David Ames, Aaron L Goldman, Phil H Lee, Dorret I Boomsma, Simon Lovestone, Sudheer Giddaluru, Stephanie Le Hellard, Manuel Mattheisen, Marc M Bohlken, Dalia Kasperaviciute, Lianne Schmaal, Stephen M Lawrie, Ingrid Agartz, Esther Walton, Diana Tordesillas-Gutierrez, Gareth E Davies, Jean Shin, Jonathan C Ipser, Louis N Vinke, Martine Hoogman, Tianye Jia, Ralph Burkhardt, Marieke Klein, Fabrice Crivello, Deborah Janowitz, Owen Carmichael, Unn K Haukvik, Benjamin S Aribisala, Helena Schmidt, Lachlan T Strike, Ching-Yu Cheng, Shannon L Risacher, Benno Pütz, Debra A Fleischman, Amelia A Assareh, Venkata S Mattay, Randy L Buckner, Patrizia Mecocci, Anders M Dale, Sven Cichon, Marco P Boks, Mar Matarin, Brenda W J H Penninx, Vince D Calhoun, M Mallar Chakravarty, Andre F Marquand, Christine Macare, Shahrzad Kharabian Masouleh, Jaap Oosterlaan, Philippe Amouyel, Katrin Hegenscheid, Jerome I Rotter, Andrew J Schork, David C M Liewald, Greig I de Zubicaray, Tien Yin Wong, Li Shen, Philipp G Sämann, Henry Brodaty, Joshua L Roffman, Eco J C de Geus, Magda Tsolaki, Susanne Erk, Kristel R van Eijk, Gianpiero L Cavalleri, Nic J A van der Wee, Andrew M McIntosh, Randy L Gollub, Kazima B Bulayeva, Manon Bernard, Jennifer S Richards, Jayandra J Himali, Markus Loeffler, Nanda Rommelse, Wolfgang Hoffmann, Lars T Westlye, Maria C Valdés Hernández, Narelle K Hansell, Theo G M van Erp, Christiane Wolf, John B J Kwok, Bruno Vellas, Andreas Heinz, Loes M Olde Loohuis, Norman Delanty, Beng-Choon Ho, Christopher R K Ching, Elena Shumskaya, Baljeet Singh, Albert Hofman, Dennis van der Meer, Georg Homuth, Bruce M Psaty, Mark E Bastin, Grant W Montgomery, Tatiana M Foroud, Simone Reppermund, Jouke-Jan Hottenga, Andrew Simmons, Andreas Meyer-Lindenberg, Wiepke Cahn, Christopher D Whelan, Marjolein M J van Donkelaar, Qiong Yang, Norbert Hosten, Robert C Green, Anbupalam Thalamuthu, Sebastian Mohnke, Hilleke E Hulshoff Pol, Honghuang Lin, Clifford R Jack, Jr, Peter R Schofield, Thomas W Mühleisen, Pauline Maillard, Steven G Potkin, Wei Wen, Evan Fletcher, Arthur W Toga, Oliver Gruber, Matthew Huentelman, George Davey Smith, Lenore J Launer, Lars Nyberg, Erik G Jönsson, Benedicto Crespo-Facorro, Nastassja Koen, Douglas N Greve, André G Uitterlinden, Daniel R Weinberger, Vidar M Steen, Iryna O Fedko, Nynke A Groenewold, Wiro J Niessen, Roberto Toro, Christophe Tzourio, William T Longstreth, Jr, M Kamran Ikram, Jordan W Smoller, Marie-Jose van Tol, Jessika E Sussmann, Tomas Paus, Hervé Lema\^ıtre, Matthias L Schroeter, Bernard Mazoyer, Ole A Andreassen, Florian Holsboer, Chantal Depondt, Dick J Veltman, Jessica A Turner, Zdenka Pausova, Gunter Schumann, Daan van Rooij, Srdjan Djurovic, Ian J Deary, Katie L McMahon, Bertram Müller-Myhsok, Rachel M Brouwer, Hilkka Soininen, Massimo Pandolfo, Thomas H Wassink, Joshua W Cheung, Thomas Wolfers, Jean-Luc Martinot, Marcel P Zwiers, Matthias Nauck, Ingrid Melle, Nicholas G Martin, Ryota Kanai, Eric Westman, René S Kahn, Sanjay M Sisodiya, Tonya White, Arvin Saremi, Hans van Bokhoven, Han G Brunner, Henry Völzke, Margaret J Wright, Dennis van 't Ent, Markus M Nöthen, Roel A Ophoff, Jan K Buitelaar, Guillén Fernández, Perminder S Sachdev, Marcella Rietschel, Neeltje E M van Haren, Simon E Fisher, Alexa S Beiser, Clyde Francks, Andrew J Saykin, Karen A Mather, Nina Romanczuk-Seiferth, Catharina A Hartman, Anita L DeStefano, Dirk J Heslenfeld, Michael W Weiner, Henrik Walter, Pieter J Hoekstra, Paul A Nyquist, Barbara Franke, David A Bennett, Hans J Grabe, Andrew D Johnson, Christopher Chen, Cornelia M van Duijn, Oscar L Lopez, Myriam Fornage, Joanna M Wardlaw, Reinhold Schmidt, Charles DeCarli, Philip L De Jager, Arno Villringer, Stéphanie Debette, Vilmundur Gudnason, Sarah E Medland, Joshua M Shulman, Paul M Thompson, Sudha Seshadri, and M Arfan Ikram. Genetic architecture of subcortical brain structures in 38,851 individuals. Nat. Genet., (51)11:1624--1636, Springer Science and Business Media LLC, November 2019. [PUMA: topic_lifescience]

Mina Ghadimi Atigh, Martin Keller-Ressel, and Pascal Mettes. Hyperbolic Busemann Learning with ideal prototypes. arXiv, 2021. [PUMA: topic_lifescience]

Samuel Schmitz, Moritz Ertelt, Rainer Merkl, and Jens Meiler. Rosetta design with co-evolutionary information retains protein function. PLoS Comput. Biol., (17)1:e1008568, Public Library of Science (PLoS), January 2021. [PUMA: topic_lifescience]

Jan-Philipp Kruse. Von der Öffentlichkeit zur Urteilsumwelt? Zur Aktualität einer Theorie der Öffentlichkeit und ihrer Probleme. Entgrenzte Öffentlichkeit, 173--194, transcript Verlag, June 2023. [PUMA: topic_lifescience] URL

Moritz Vinzent Seiler, Raphael Patrick Prager, Pascal Kerschke, and Heike Trautmann. A collection of deep learning-based feature-free approaches for characterizing single-objective continuous fitness landscapes. Proceedings of the Genetic and Evolutionary Computation Conference, ACM, New York, NY, USA, July 2022. [PUMA: topic_lifescience]

Jan-Philipp Kruse, and Sabine Müller-Mall. Digitale Transformationen von Öffentlichkeit. Ausgangspunkte und Horizonte einer transdisziplinären Perspektivbildung. Digitale Transformationen der Öffentlichkeit, 7--16, Velbrück Wissenschaft, 2020. [PUMA: topic_lifescience]

Raphael Patrick Prager, Moritz Vinzent Seiler, Heike Trautmann, and Pascal Kerschke. Automated algorithm selection in single-objective continuous optimization: A comparative study of deep learning and landscape analysis methods. Lecture Notes in Computer Science, 3--17, Springer International Publishing, Cham, 2022. [PUMA: topic_lifescience]

Clara T Schoeder, Pavlo Gilchuk, Amandeep K Sangha, Kaitlyn V Ledwitch, Delphine C Malherbe, Xuan Zhang, Elad Binshtein, Lauren E Williamson, Cristina E Martina, Jinhui Dong, Erica Armstrong, Rachel Sutton, Rachel Nargi, Jessica Rodriguez, Natalia Kuzmina, Brooke Fiala, Neil P King, Alexander Bukreyev, James E Crowe, Jr, and Jens Meiler. Epitope-focused immunogen design based on the ebolavirus glycoprotein HR2-MPER region. PLoS Pathog., (18)5:e1010518, Public Library of Science (PLoS), May 2022. [PUMA: topic_lifescience]

Nina G Bozhanova, Joel M Harp, Brian J Bender, Alexey S Gavrikov, Dmitry A Gorbachev, Mikhail S Baranov, Christina B Mercado, Xuan Zhang, Konstantin A Lukyanov, Alexander S Mishin, and Jens Meiler. Computational redesign of a fluorogen activating protein with Rosetta. PLoS Comput. Biol., (17)11:e1009555, Public Library of Science (PLoS), November 2021. [PUMA: topic_lifescience]

Moritz Seiler, Janina Pohl, Jakob Bossek, Pascal Kerschke, and Heike Trautmann. Deep learning as a competitive feature-free approach for automated algorithm selection on the traveling salesperson problem. Parallel Problem Solving from Nature -- PPSN XVI, 48--64, Springer International Publishing, Cham, 2020. [PUMA: topic_lifescience]

Gail Davies, Max Lam, Sarah E Harris, Joey W Trampush, Michelle Luciano, W David Hill, Saskia P Hagenaars, Stuart J Ritchie, Riccardo E Marioni, Chloe Fawns-Ritchie, David C M Liewald, Judith A Okely, Ari V Ahola-Olli, Catriona L K Barnes, Lars Bertram, Joshua C Bis, Katherine E Burdick, Andrea Christoforou, Pamela DeRosse, Srdjan Djurovic, Thomas Espeseth, Stella Giakoumaki, Sudheer Giddaluru, Daniel E Gustavson, Caroline Hayward, Edith Hofer, M Arfan Ikram, Robert Karlsson, Emma Knowles, Jari Lahti, Markus Leber, Shuo Li, Karen A Mather, Ingrid Melle, Derek Morris, Christopher Oldmeadow, Teemu Palviainen, Antony Payton, Raha Pazoki, Katja Petrovic, Chandra A Reynolds, Muralidharan Sargurupremraj, Markus Scholz, Jennifer A Smith, Albert V Smith, Natalie Terzikhan, Anbupalam Thalamuthu, Stella Trompet, Sven J van der Lee, Erin B Ware, B Gwen Windham, Margaret J Wright, Jingyun Yang, Jin Yu, David Ames, Najaf Amin, Philippe Amouyel, Ole A Andreassen, Nicola J Armstrong, Amelia A Assareh, John R Attia, Deborah Attix, Dimitrios Avramopoulos, David A Bennett, Anne C Böhmer, Patricia A Boyle, Henry Brodaty, Harry Campbell, Tyrone D Cannon, Elizabeth T Cirulli, Eliza Congdon, Emily Drabant Conley, Janie Corley, Simon R Cox, Anders M Dale, Abbas Dehghan, Danielle Dick, Dwight Dickinson, Johan G Eriksson, Evangelos Evangelou, Jessica D Faul, Ian Ford, Nelson A Freimer, He Gao, Ina Giegling, Nathan A Gillespie, Scott D Gordon, Rebecca F Gottesman, Michael E Griswold, Vilmundur Gudnason, Tamara B Harris, Annette M Hartmann, Alex Hatzimanolis, Gerardo Heiss, Elizabeth G Holliday, Peter K Joshi, Mika Kähönen, Sharon L R Kardia, Ida Karlsson, Luca Kleineidam, David S Knopman, Nicole A Kochan, Bettina Konte, John B Kwok, Stephanie Le Hellard, Teresa Lee, Terho Lehtimäki, Shu-Chen Li, Christina M Lill, Tian Liu, Marisa Koini, Edythe London, Will T Longstreth, Jr, Oscar L Lopez, Anu Loukola, Tobias Luck, Astri J Lundervold, Anders Lundquist, Leo-Pekka Lyytikäinen, Nicholas G Martin, Grant W Montgomery, Alison D Murray, Anna C Need, Raymond Noordam, Lars Nyberg, William Ollier, Goran Papenberg, Alison Pattie, Ozren Polasek, Russell A Poldrack, Bruce M Psaty, Simone Reppermund, Steffi G Riedel-Heller, Richard J Rose, Jerome I Rotter, Panos Roussos, Suvi P Rovio, Yasaman Saba, Fred W Sabb, Perminder S Sachdev, Claudia L Satizabal, Matthias Schmid, Rodney J Scott, Matthew A Scult, Jeannette Simino, P Eline Slagboom, Nikolaos Smyrnis, A\"ıcha Soumaré, Nikos C Stefanis, David J Stott, Richard E Straub, Kjetil Sundet, Adele M Taylor, Kent D Taylor, Ioanna Tzoulaki, Christophe Tzourio, André Uitterlinden, Veronique Vitart, Aristotle N Voineskos, Jaakko Kaprio, Michael Wagner, Holger Wagner, Leonie Weinhold, K Hoyan Wen, Elisabeth Widen, Qiong Yang, Wei Zhao, Hieab H H Adams, Dan E Arking, Robert M Bilder, Panos Bitsios, Eric Boerwinkle, Ornit Chiba-Falek, Aiden Corvin, Philip L De Jager, Stéphanie Debette, Gary Donohoe, Paul Elliott, Annette L Fitzpatrick, Michael Gill, David C Glahn, Sara Hägg, Narelle K Hansell, Ahmad R Hariri, M Kamran Ikram, J Wouter Jukema, Eero Vuoksimaa, Matthew C Keller, William S Kremen, Lenore Launer, Ulman Lindenberger, Aarno Palotie, Nancy L Pedersen, Neil Pendleton, David J Porteous, Katri Räikkönen, Olli T Raitakari, Alfredo Ramirez, Ivar Reinvang, Igor Rudan, Dan Rujescu, Reinhold Schmidt, Helena Schmidt, Peter W Schofield, Peter R Schofield, John M Starr, Vidar M Steen, Julian N Trollor, Steven T Turner, Cornelia M Van Duijn, Arno Villringer, Daniel R Weinberger, David R Weir, James F Wilson, Anil Malhotra, Andrew M McIntosh, Catharine R Gale, Sudha Seshadri, Thomas H Mosley, Jr, Jan Bressler, Todd Lencz, and Ian J Deary. Study of 300,486 individuals identifies 148 independent genetic loci influencing general cognitive function. Nat. Commun., (9)1Springer Science and Business Media LLC, May 2018. [PUMA: topic_lifescience]

Martin Keller-Ressel, and Stephanie Nargang. Hydra: a method for strain-minimizing hyperbolic embedding of network- and distance-based data. J. Complex Netw., (8)1Oxford University Press (OUP), February 2020. [PUMA: topic_lifescience]

Raphael Patrick Prager, Moritz Vinzent Seiler, Heike Trautmann, and Pascal Kerschke. Towards feature-free automated algorithm selection for single-objective continuous black-box optimization. 2021 IEEE Symposium Series on Computational Intelligence (SSCI), IEEE, December 2021. [PUMA: topic_lifescience]

Jonathan Heins, Jakob Bossek, Janina Pohl, Moritz Seiler, Heike Trautmann, and Pascal Kerschke. On the potential of normalized TSP features for automated algorithm selection. Proceedings of the 16th ACM/SIGEVO Conference on Foundations of Genetic Algorithms, ACM, New York, NY, USA, September 2021. [PUMA: topic_lifescience]

Edith Hofer, Gennady V Roshchupkin, Hieab H H Adams, Maria J Knol, Honghuang Lin, Shuo Li, Habil Zare, Shahzad Ahmad, Nicola J Armstrong, Claudia L Satizabal, Manon Bernard, Joshua C Bis, Nathan A Gillespie, Michelle Luciano, Aniket Mishra, Markus Scholz, Alexander Teumer, Rui Xia, Xueqiu Jian, Thomas H Mosley, Yasaman Saba, Lukas Pirpamer, Stephan Seiler, James T Becker, Owen Carmichael, Jerome I Rotter, Bruce M Psaty, Oscar L Lopez, Najaf Amin, Sven J van der Lee, Qiong Yang, Jayandra J Himali, Pauline Maillard, Alexa S Beiser, Charles DeCarli, Sherif Karama, Lindsay Lewis, Mat Harris, Mark E Bastin, Ian J Deary, A Veronica Witte, Frauke Beyer, Markus Loeffler, Karen A Mather, Peter R Schofield, Anbupalam Thalamuthu, John B Kwok, Margaret J Wright, David Ames, Julian Trollor, Jiyang Jiang, Henry Brodaty, Wei Wen, Meike W Vernooij, Albert Hofman, André G Uitterlinden, Wiro J Niessen, Katharina Wittfeld, Robin Bülow, Uwe Völker, Zdenka Pausova, G Bruce Pike, Sophie Maingault, Fabrice Crivello, Christophe Tzourio, Philippe Amouyel, Bernard Mazoyer, Michael C Neale, Carol E Franz, Michael J Lyons, Matthew S Panizzon, Ole A Andreassen, Anders M Dale, Mark Logue, Katrina L Grasby, Neda Jahanshad, Jodie N Painter, Luc\'ıa Colodro-Conde, Janita Bralten, Derrek P Hibar, Penelope A Lind, Fabrizio Pizzagalli, Jason L Stein, Paul M Thompson, Sarah E Medland, ENIGMA consortium, Perminder S Sachdev, William S Kremen, Joanna M Wardlaw, Arno Villringer, Cornelia M van Duijn, Hans J Grabe, William T Longstreth, Jr, Myriam Fornage, Tomas Paus, Stephanie Debette, M Arfan Ikram, Helena Schmidt, Reinhold Schmidt, and Sudha Seshadri. Genetic correlations and genome-wide associations of cortical structure in general population samples of 22,824 adults. Nat. Commun., (11)1:4796, Springer Science and Business Media LLC, September 2020. [PUMA: topic_lifescience]

Martin Keller-Ressel, and Stephanie Nargang. The hyperbolic geometry of financial networks. Sci. Rep., (11)1:4732, Springer Science and Business Media LLC, February 2021. [PUMA: topic_lifescience]