Publications

Robert Hecht, Polly Hudson, Oriol Gavaldà, Allan Hawas, Falli Palaiologou, Hendrik Herold, and Taimaz Larimian. Colouring Cities: A network of open platforms to improve the availability of data on the building stock for research, government and society. Zenodo, 2025. [PUMA: data open_plattforms yaff] URL

Yuri Kheifetz, Holger Kirsten, Andreas Schuppert, and Markus Scholz. Modeling the Complete Dynamics of the SARS-CoV-2 Pandemic of Germany and Its Federal States Using Multiple Levels of Data. Viruses, (17)7:981, MDPI AG, July 2025. [PUMA: Data Pandemic SARS-CoV-2 yaff] URL

Marie Teich, Wilmer Leal, and Jürgen Jost. Diachronic data analysis supports and refines conceptual metaphor theory. PLOS Complex Systems, (2)8:1-26, Public Library of Science, August 2025. [PUMA: analysis data metaphor_theory yaff] URL

Masoud Abedi, Navid Shekarchizadeh, Pierre-Louis Bazin, Nico Scherf, Julia Lier, Christa-Caroline Bergner, Wolfgang Köhler, and Toralf Kirsten. HeteroMRI: Robust white matter abnormality classification across multi-scanner MRI data. GigaScience, (14):giaf092, August 2025. [PUMA: HeteroMRI MRI data mulitscanner xack yaff] URL

Self-Supervised coherence-based denoising of cryoseismological distributed acoustic sensing data. In Johanna Zitt (Eds.), Journal of Geophysical Research: Machine Learning and Computation, July 2025. [PUMA: acoustic cryoseismology data sensing xack yaff]

Maja Schneider, Charini Nanayakkara, Matthias Mohn, Peter Christen, and Erhard Rahm. Generating Semantically Enriched Mobility Data from Travel Diaries. The 29th European Conference on Advances in Databases and Information Systems (ADBIS), 2026. [PUMA: data diaries mobility travel xack yaff]

E. Cherif, T. Kattenborn, L. A. Brown, M. Ewald, K. Berger, P. D. Dao, T. B. Hank, E. Laliberté, B. Lu, and H. Feilhauer. Uncertainty Assessment in Deep Learning-based Plant Trait Retrievals from Hyperspectral data. EGUsphere, (2025):1--35, 2025. [PUMA: data deep_learning hyperspectral xack yaff]

Vincent D Friedrich, Peter Pennitz, Emanuel Wyler, Julia M Adler, Dylan Postmus, Luiz Gustavo Teixeira Alves, Julia Prigann, Fabian Pott, Daria Vladimirova, Thomas Hoefler, Cengiz Goekeri, Markus Landthaler, Christine Goffinet, Antoine-Emmanuel Saliba, Markus Scholz, Martin Witzenrath, Jakob Trimpert, Holger Kirsten, and Geraldine Nouailles. Neural Network-Assisted Humanization of COVID-19 Hamster scRNAseq Data Reveals Matching Severity States in Human Disease. Cold Spring Harbor Laboratory, January 2024. [PUMA: HCOVID-19 Severity States scRNAseq yaff xack data] URL

Chaonan Ji, Tonio Fincke, Vitus Benson, Gustau Camps-Valls, Miguel-Angel Fernandez-Torres, Fabian Gans, Guido Kraemer, Francesco Martinuzzi, David Montero, Karin Mora, Oscar J Pellicer-Valero, Claire Robin, Maximilian Soechting, Melanie Weynants, and Miguel D Mahecha. DeepExtremeCubes: Integrating Earth system spatio-temporal data for impact assessment of climate extremes. arXiv preprint arXiv:2406.18179, 2024. [PUMA: DeepExtremeCubes climate data earth extremes yaff]

Beth Russell, Katharina Beyer, Ailbhe Lawlor, Monique J. Roobol, Lionne D.F. Venderbos, Sebastiaan Remmers, Erik Briers, Sara J. MacLennan, Steven MacLennan, Muhammad Imran Omar, Mieke Van Hemelrijck, Emma Smith, James N’Dow, Karin Plass, Maria Ribal, Nicolas Mottet, Robert Shepherd, Tom Abbott, Ken Mastris, Lisa Moris, Michael Lardas, Thomas Van den Broeck, Peter-Paul Willemse, Nicola Fossati, Karl Pang, Riccardo Campi, Isabella Greco, Mauro Gacci, Sergio Serni, Anders Bjartell, Ragnar Lonnerbro, Alberto Briganti, Daniele Crosti, Roberto Garzonio, Giorgio Gandaglia, Martina Faticoni, Grant office, Chris Bangma, Maria Jongerden, Derya Tilki, Anssi Auvinen, Teemu Murtola, Tapio Visakorpi, Kirsi Talala, Teuvo Tammela, Aino Siltari, Stephane Lejeune, Laurence Colette, Simona Caputova, Delielena Poli, Sophie Byrne, Luz Fialho, Ashley Rowland, Neo Tapela, Nicola Di Flora, Kathi Apostolidis, Valerie Lemair, Bertrand De Meulder, Charles Auffray, Nesrine Taibi, Ayman Hijazy, Albert Saporta, Kai Sun, Shaun Power, Nazanin Zounemat Kermani, Kees van Bochove, Azadeh Tafreshiha, Chiara Bernini, Denis Horgan, Louise Fullwood, Marc Holtorf, Doron Lancet, Gabi Bernstein, Sheela Tripathee, Manfred Wirth, Michael Froehner, Beate Brenner, Angelika Borkowetz, Christian Thomas, Friedemann Horn, Kristin Reiche, Markus Kreuz, Andreas Josefsson, Delila Gasi Tandefelt, Jonas Hugosson, Jack Schalken, Henkjan Huisman, Thomas Hofmarcher, Peter Lindgren, Emelie Andersson, Adam Fridhammar, Monica Tames Grijalva, Susan Evans-Axelsson, Frank Verholen, Jihong Zong, John-Edward Butler-Ransohoff, Todd Williamson, Reg Waldeck, Amanda Bruno, Ekaterina Nevedomskaya, Samuel Fatoba, Niculae Constantinovici, Carl Steinbeisser, Monika Maass, Patrizia Torremante, Emmanuelle Dochy, Federica Pisa, Marc Dietrich Voss, Kishore Papineni, Jing Wang silvanto, Robert Snijder, Xuewei Wang, Mark Lambrecht, Russ Wolfinger, Sherinne Eid, Soundarya Palanisamy, Samiul Haque, Laurent Antoni, Angela Servan, Katie Pascoe, Paul Robinson, Joana Lencart, Bertrand Jaton, Heidi Turunen, Olavi Kilkku, Pasi Pohjanjousi, Olli Voima, Liina Nevalaita, Keijo Punakivi, Sarah Seager, Shilpa Ratwani, Katarzyna Grzeslak, James Brash, Elaine Longden-Chapman, Danny Burke, Muriel Licour, Sarah Payne, Alan Yong, Flavia Lujan, Sophia Le Mare, Jan Hendrich, Michael Bussmann, Juckeland, Kotik, Delielena Poli, and Christian Reich. Survivorship Data in Prostate Cancer: Where Are We and Where Do We Need To Be?. European Urology Open Science, (59):27–29, Elsevier BV, January 2024. [PUMA: Cancer: Prostate Survivorship imported zno data] URL

Kimberly E Roche, Johannes R Bjork, Mauna R Dasari, Laura Grieneisen, David Jansen, Trevor J Gould, Laurence R Gesquiere, Luis B Barreiro, Susan C Alberts, Ran Blekhman, Jack A Gilbert, Jenny Tung, Sayan Mukherjee, and Elizabeth A Archie. Universal gut microbial relationships in the gut microbiome of wild baboons. Elife, (12)eLife Sciences Publications, Ltd, May 2023. [PUMA: bacteria between community correlations cynocephalus data disease dynamics ecology gut infectious longitudinal microbiology microbiome microbiota personalization universality yaff] URL

Peter Christen, and Rainer Schnell. Thirty-three myths and misconceptions about population data: from data capture and processing to linkage. Int. J. Popul. Data Sci., (8)1:2115, Swansea University, January 2023. [PUMA: administrative data editing errors linkage personal quality record xack]

Johannes Frey, Marvin Hofer, and Sebastian Hellmann. Studying Linked Data Accessibility Healthiness for the Long Tail of the Data Web.. QuWeDa/MEPDaW@ ISWC, 55--64, 2023. [PUMA: Accessibility Healthiness Linked Long Tail xack data web]

Lucas Lange, Tobias Schreieder, Victor Christen, and Erhard Rahm. Slice it up: Unmasking user identities in smartwatch health data. 2023. [PUMA: data health smartwatch xack]

Parvaneh Joharinad, and Jürgen Jost. Mathematical principles of topological and geometric data analysis. Springer International Publishing, Cham, 2023. [PUMA: Mathematical analysis data geometric nopdf topological]

Oliver Kirsten, Martin Bogdan, and Sophie Adama. Evaluating the DoC-Forest tool for Classifying the State of Consciousness in a Completely Locked-In Syndrome Patient. 2023 7th International Conference on Imaging, Signal Processing and Communications (ICISPC), 37-41, 2023. [PUMA: Complexity Computational Consciousness Information Locked-In Measures Modeling Neuroscience Prediction Predictive Processing Signal Syndrome Theory Training algorithms and data learning modeling models processing zno machine]

Maja Schneider, Erik Buchmann, and Erhardt Rahm. Distributed, Privacy-Aware Location Data Aggregation. 2024 IEEE 6th International Conference on Trust, Privacy and Security in Intelligent Systems, and Applications (TPS-ISA), 31–40, 2024. [PUMA: Aggregation Distributed Location Privacy-Aware data xack] URL

Ekaterina Borisova, Raia Abu Ahmad, Georg Rehm, Ricardo Usbeck, Jennifer D’Souza, Markus Stocker, Sören Auer, Judith Gilsbach, Anastasia Wolschewski, Johannes Keller, Daniel Schneider, Thomas Neumuth, and Sonja Schimmler. NFDI4DS Transfer and Application. Gesellschaft für Informatik e.V., 2023. [PUMA: Infrastructures Intelligence NFDI NFDI4DS Research Science zno artificial data] URL

Sonja Schimmler, Bianca Wentzel, Arnim Bleier, Stefan Dietze, Saurav Karmakar, Peter Mutschke, Angelie Kraft, Tilahun A. Taffa, Ricardo Usbeck, Zeyd Boukhers, Sören Auer, Leyla J. Castro, Marcel R. Ackermann, Thomas Neumuth, Daniel Schneider, Ziawasch Abedjan, Atif Latif, Fidan Limani, Raia Abu Ahmad, Georg Rehm, Sima Attar Khorasani, and Matthias Lieber. NFDI4DS Infrastructure and Services. Gesellschaft für Informatik e.V., 2023. [PUMA: Infrastructures NFDI NFDI4DS Research zno data] URL

Aris Marcolongo, Mykhailo Vladymyrov, Sebastian Lienert, Nadav Peleg, Sigve Haug, and Jakob Zscheischler. Predicting years with extremely low gross primary production from daily weather data using Convolutional Neural Networks. Environmental Data Science, (1):e2, 2022. [PUMA: Convolutional Predicting data gross low primary production weather zno networks neural]