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Clusters and Unique Least Common Ancestors in Directed Acyclic Graphs, , , and . (March 2024)Local RNA folding revisited, , , , , , and . Journal of Bioinformatics and Computational Biology, 21 (04): 2350016 (2023)RNA interaction format: a general data format for RNA interactions, , , , , , , and . Bioinformatics, 39 (11): btad665 (2023)Compatibility of partitions with trees, hierarchies and split systems, , and . Discrete Applied Mathematics, (June 2022)Phylogenetic information as soft constraints in RNA secondary structure prediction, , , , , , and . International Symposium on Bioinformatics Research and Applications, page 267--279. Springer, (2023)Partial Fitch Graphs: Characterization, Satisfiability and Complexity, , , , , and . (May 2024)Nesting of Touching Polygons, , and . arXiv preprint arXiv:2409.13040, (2024)Complete edge-colored permutation graphs, , , , , and . Advances in Applied Mathematics, (August 2022)Sorting signed permutations by tandem duplication random loss and inverse tandem duplication random loss, , and . Advances in Applied Mathematics, (2024)On the realisability of chemical pathways, , , , , and . International Symposium on Bioinformatics Research and Applications, page 409--419. Springer, (2023)