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2SetQuence & SetOmic: Deep Set Transformer-based Representations of Cancer Multi-Omics
N. Jurenaite, D. León-Periñán, V. Donath, S. Torge, and R. Jäkel. 2022 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB), page 1-9. (August 2022)
17 days ago by @scadsfct
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topic_lifescience
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2SetQuence & SetOmic: Deep Set Transformers for Whole Genome and Exome Tumour Analysis
N. Jurenaite, D. León-Periñán, V. Donath, S. Torge, and R. Jäkel. BioSystems, (January 2024)
17 days ago by @scadsfct
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topic_lifescience
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2The Precise Complexity of Reasoning in $ALC$ with $ømega$-Admissible Concrete Domains (Extended Version)
S. Borgwardt, F. Bortoli, and P. Koopmann. (2024)
24 days ago by @scadsfct
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2Logics with Concrete Domains: First-Order Properties, Abstract Expressive Power, and (Un)Decidability
F. Baader, and F. De Bortoli. SIGAPP Appl. Comput. Rev., 24 (3): 5–17 (Oct 8, 2024)
24 days ago by @scadsfct
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2Modelling Non-Stationarity in Asymptotically Independent Extremes
C. Murphy-Barltrop, and J. Wadsworth. Computational Statistics and Data Analysis, (November 2024)
24 days ago by @scadsfct
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2The SPAR Model: A New Paradigm for Multivariate Extremes: Application to Joint Distributions of Metocean Variables
E. Mackay, C. Murphy-Barltrop, and P. Jonathan. Journal of Offshore Mechanics and Arctic Engineering, (July 2024)
24 days ago by @scadsfct
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1Improving Estimation for Asymptotically Independent Bivariate Extremes via Global Estimators for the Angular Dependence Function
C. Murphy-Barltrop, J. Wadsworth, and E. Eastoe. Extremes, (Aug 13, 2024)
24 days ago by @scadsfct
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1A high-order fully Lagrangian particle level-set method for dynamic surfaces
L. Schulze, S. Veettil, and I. Sbalzarini. CoRR, (2023)
26 days ago by @scadsfct
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1Chapter 5 - Artificial intelligence (AI) enhanced nanomotors and active matter
F. Cichos, S. Landin, and R. Pradip. Intelligent Nanotechnology, Elsevier, (2023)
26 days ago by @scadsfct
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Active
Feedback
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Optical
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control
control,
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particles,
reinforcement
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1Roadmap on Deep Learning for Microscopy
G. Volpe, C. W�hlby, L. Tian, M. Hecht, A. Yakimovich, K. Monakhova, L. Waller, I. Sbalzarini, C. Metzler, M. Xie and 65 other author(s). (2023)
26 days ago by @scadsfct
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1Proven Distributed Memory Parallelization of Particle Methods
J. Pahlke, and I. Sbalzarini. (Sep 18, 2024)
26 days ago by @scadsfct
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algorithmics,
algorithms,
bounds,
definition,
distributed
engineering
formal
memory,
meshfree
methods,
parallelization,
particle
scalability
simulation
software
algorithmics,algorithms,bounds,definition,distributedengineeringformalmemory,meshfreemethods,parallelization,particlescalabilitysimulationsoftware
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1Stability selection enables robust learning of partial differential equations from limited noisy data
S. Maddu, B. Cheeseman, I. Sbalzarini, and C. Müller. (2019)
26 days ago by @scadsfct
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1A Gaussian jump process formulation of the reaction�diffusion master equation enables faster exact stochastic simulations
T. Subic, and I. Sbalzarini. The Journal of Chemical Physics, (November 2022)
26 days ago by @scadsfct
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1Benchmarking Large Language Models for Bio-Image Analysis Code Generation
R. Haase, C. Tischer, J. H�rich�, and N. Scherf. (April 2024)
26 days ago by @scadsfct
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1Variational inference accelerates accurate DNA mixture deconvolution
M. Susik, and I. Sbalzarini. Forensic Science International: Genetics, (July 2023)
26 days ago by @scadsfct
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1Quantifying Molecular Dynamics within Complex Cellular Morphologies using LLSM?FRAP (Small Methods 6/2022)
H. Colin?York, J. Heddleston, E. Wait, N. Karedla, M. deSantis, S. Khuon, T. Chew, I. Sbalzarini, and M. Fritzsche. Small Methods, (June 2022)
26 days ago by @scadsfct
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1Adaptive weighting of Bayesian physics informed neural networks for multitask and multiscale forward and inverse problems
S. Perez, S. Maddu, I. Sbalzarini, and P. Poncet. J. Comput. Phys., (2023)
26 days ago by @scadsfct
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1Hamiltonian Monte Carlo with strict convergence criteria reduces run-to-run variability in forensic DNA mixture deconvolution
M. Susik, H. Schönborn, and I. Sbalzarini. Forensic Science International: Genetics, (September 2022)
26 days ago by @scadsfct
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1Analysis of the Hamiltonian Monte Carlo genotyping algorithm on PROVEDIt mixtures including a novel precision benchmark
M. Susik, and I. Sbalzarini. Forensic Science International: Genetics, (2023)
26 days ago by @scadsfct
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DNA
HMC
Probabilistic
Validation,
genotyping,
mixtures,
DNAHMCProbabilisticValidation,genotyping,mixtures,
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1Efficient Raycasting of Volumetric Depth Images for Remote Visualization of Large Volumes at High Frame Rates
A. Gupta, U. Günther, P. Incardona, G. Reina, S. Frey, S. Gumhold, and I. Sbalzarini. 2023 IEEE 16th Pacific Visualization Symposium (PacificVis), 19, page 61�70. IEEE, (April 2023)
26 days ago by @scadsfct
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PUMA

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publications (hide)1315
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2SetQuence & SetOmic: Deep Set Transformer-based Representations of Cancer Multi-Omics

2SetQuence & SetOmic: Deep Set Transformers for Whole Genome and Exome Tumour Analysis

2The Precise Complexity of Reasoning in $ALC$ with $ømega$-Admissible Concrete Domains (Extended Version)

2Logics with Concrete Domains: First-Order Properties, Abstract Expressive Power, and (Un)Decidability

2Modelling Non-Stationarity in Asymptotically Independent Extremes

2The SPAR Model: A New Paradigm for Multivariate Extremes: Application to Joint Distributions of Metocean Variables

1Improving Estimation for Asymptotically Independent Bivariate Extremes via Global Estimators for the Angular Dependence Function

1A high-order fully Lagrangian particle level-set method for dynamic surfaces

1Chapter 5 - Artificial intelligence (AI) enhanced nanomotors and active matter

1Roadmap on Deep Learning for Microscopy

1Proven Distributed Memory Parallelization of Particle Methods

1Stability selection enables robust learning of partial differential equations from limited noisy data

1A Gaussian jump process formulation of the reaction�diffusion master equation enables faster exact stochastic simulations

1Benchmarking Large Language Models for Bio-Image Analysis Code Generation

1Variational inference accelerates accurate DNA mixture deconvolution

1Quantifying Molecular Dynamics within Complex Cellular Morphologies using LLSM?FRAP (Small Methods 6/2022)

1Adaptive weighting of Bayesian physics informed neural networks for multitask and multiscale forward and inverse problems

1Hamiltonian Monte Carlo with strict convergence criteria reduces run-to-run variability in forensic DNA mixture deconvolution

1Analysis of the Hamiltonian Monte Carlo genotyping algorithm on PROVEDIt mixtures including a novel precision benchmark

1Efficient Raycasting of Volumetric Depth Images for Remote Visualization of Large Volumes at High Frame Rates

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