Publications

Michelle Philipp, Christopher W Moth, Nikola Ristic, Johanna K S Tiemann, Florian Seufert, Aleksandra Panfilova, Jens Meiler, Peter W Hildebrand, Amelie Stein, Daniel Wiegreffe, and others. MutationExplorer: a webserver for mutation of proteins and 3D visualization of energetic impacts. Nucleic Acids Research, gkae301, Oxford University Press, 2024. [PUMA: topic_lifescience 3d mutation mutationexplorer proteins webserver]

John Anders, Hannes Petruschke, Nico Jehmlich, Sven-Bastiaan Haange, Martin von Bergen, and Peter F Stadler. A workflow to identify novel proteins based on the direct mapping of peptide-spectrum-matches to genomic locations. BMC Bioinformatics, (22)1:277, Springer Science and Business Media LLC, May 2021. [PUMA: Metaproteogenomics; Microbial Peptide-spectrum Small communitities; matches; proteins]

Kaitlyn V Ledwitch, Georg Künze, Jacob R McKinney, Elleansar Okwei, Katherine Larochelle, Lisa Pankewitz, Soumya Ganguly, Heather L Darling, Irene Coin, and Jens Meiler. Sparse pseudocontact shift NMR data obtained from a non-canonical amino acid-linked lanthanide tag improves integral membrane protein structure prediction. J. Biomol. NMR, (77)3:69--82, June 2023. [PUMA: topic_lifescience (IMPs); (PCSs); (ncAAs); Click Integral Non-canonical Pseudocontact Rosetta; Structure acids amino chemistry; membrane prediction proteins shifts]