Publications

Sonja J Prohaska, Sarah J Berkemer, Fabian Gärtner, Thomas Gatter, Nancy Retzlaff, Students of the Graphs and Biological Networks Lab 2017, Christian Höner Zu Siederdissen, and Peter F Stadler. Expansion of gene clusters, circular orders, and the shortest Hamiltonian path problem. J. Math. Biol., (77)2:313--341, August 2018. [PUMA: Evolution Hamiltonian Kalmanson Non-homologous Phylogenetic Unequal clusters; combinatorics; crossing gene metrics; of over path problems; recombination;]

Annachiara Korchmaros, David Schaller, Marc Hellmuth, and Peter F. Stadler. Quasi-best match graphs. Discrete Applied Mathematics, (331):104--125, 2023. [PUMA: topic_mathfoundation Best Colored Hierarchies, Phylogenetic Rooted combinatorics, directed graphs, matches trees,] URL

Marc Hellmuth, David Schaller, and Peter F. Stadler. Clustering systems of phylogenetic networks. Theory in Biosciences, (142)4:301–358, Springer Science and Business Media LLC, August 2023. [PUMA: Clustering networks phylogenetic systems] URL