Publications

Hope Woods, Dominic L Schiano, Jonathan I Aguirre, Kaitlyn V Ledwitch, Eli F McDonald, Markus Voehler, Jens Meiler, and Clara T Schoeder. Computational modeling and prediction of deletion mutants. Structure, (31)6:713--723.e3, Elsevier BV, June 2023. [PUMA: AlphaFold Deletion Modeling NMR Rosetta SAM Zno domain indel mutation]

Oliver Kirsten, Martin Bogdan, and Sophie Adama. Evaluating the DoC-Forest tool for Classifying the State of Consciousness in a Completely Locked-In Syndrome Patient. 2023 7th International Conference on Imaging, Signal Processing and Communications (ICISPC), 37-41, 2023. [PUMA: Complexity Computational Consciousness Information Learning Locked-In Machine Measures Modeling Neuroscience Prediction Predictive Processing Signal Syndrome Theory Training Zno algorithms and data learning modeling models processing]

Gaia Olcese, Paul D Bates, Jeffrey C Neal, Christopher C Sampson, Oliver E J Wing, Niall Quinn, Callum J R Murphy-Barltrop, and Izzy Probyn. Developing a Fluvial and Pluvial Stochastic Flood Model of Southeast Asia. Water Resources Research, (60 (2024))6Blackwell, Jun 3, 2024. [PUMA: topic_mathfoundation Asia, FIS_scads Southeast exposure, flood, global hydrological modeling models, population stochastic]

Christian Genest, Ostap Okhrin, and Taras Bodnar. Copula modeling from Abe Sklar to the present day. Journal of Multivariate Analysis, (201)Academic Press Inc., May 2024. [PUMA: topic_engineering Copula Dependence FIS_scads modeling models,]

Suryanarayana Maddu, Dominik Sturm, Bevan L. Cheeseman, Christian L. Müller, and Ivo F. Sbalzarini. Learning computable models from data. 1--6, 2021. [PUMA: Differential ENO-WENO, FIS_scads Neural Surrogate modeling networks, operators,]

Minh H Tran, Clara T Schoeder, Kevin L Schey, and Jens Meiler. Computational structure prediction for antibody-antigen complexes from hydrogen-deuterium exchange mass spectrometry: Challenges and outlook. Front. Immunol., (13):859964, Frontiers Media SA, May 2022. [PUMA: topic_lifescience (HDX-MS); antibody-antigen biology; docking; epitope-paratope exchange hydrogen-deuterium identification; integrative interaction; mass modeling protein-protein spectrometry structural structure]