Publications

Najia Ahmadi, Quang Vu Nguyen, Martin Sedlmayr, and Markus Wolfien. A comparative patient-level prediction study in OMOP CDM: applicative potential and insights from synthetic data. Scientific reports, (14)1Nature Publishing Group, Jan 27, 2024. [PUMA: Databases, Electronic FIS_scads Factual, Health Humans, Informatics, Learning, Machine Medical Records topic_lifescience]

Markus Wolfien, Najia Ahmadi, Kai Fitzer, Sophia Grummt, Kilian-Ludwig Heine, Ian-C Jung, Dagmar Krefting, Andreas Kühn, Yuan Peng, Ines Reinecke, Julia Scheel, Tobias Schmidt, Paul Schmücker, Christina Schüttler, Dagmar Waltemath, Michele Zoch, and Martin Sedlmayr. Ten Topics to Get Started in Medical Informatics Research. Journal of Medical Internet Research, (25)JMIR Publications Inc., Jul 24, 2023. [PUMA: topic_lifescience Algorithms, Clinical Curriculum, Digital FIS_scads Germany, Health Humans, Informatics, Interdisciplinary Medical Research clinical communication, data, digital health health, informatics informatics, interdisciplinary medical research]

Neringa Jurenaite, Daniel León-Periñán, Veronika Donath, Sunna Torge, and René Jäkel. SetQuence & SetOmic: Deep set transformers for whole genome and exome tumour analysis. BioSystems, (235)Elsevier, January 2024. [PUMA: topic_federatedlearn livinglab Artificial Biomedical Exome/genetics, FIS_scads Humans, Intelligence, Medical Neoplasms/genetics Oncology, Research,]

Alexander Kurz, Katja Hauser, Hendrik Alexander Mehrtens, Eva Krieghoff-Henning, Achim Hekler, Jakob Nikolas Kather, Stefan Fröhling, Christof von Kalle, and Titus Josef Brinker. Uncertainty estimation in medical image classification: Systematic review. JMIR Med. Inform., (10)8:e36427, August 2022. [PUMA: topic_lifescience calibration; classification; deep detection; estimation image imaging; learning; medical network out-of-distribution uncertainty]

Jens Przybilla, Peter Ahnert, Holger Bogatsch, Frank Bloos, Frank M Brunkhorst, SepNet Critical Care Trials Group, Progress Study Group, Michael Bauer, Markus Loeffler, Martin Witzenrath, Norbert Suttorp, and Markus Scholz. Markov state modelling of disease courses and mortality risks of patients with community-acquired pneumonia. J. Clin. Med., (9)2:393, MDPI AG, February 2020. [PUMA: Markov SOFA community-acquired continuous-time decision making; medical model model; pneumonia; prognosis; score; sepsis; stochastic]

Jan Gaebel, Hans-Georg Wu, Alexander Oeser, Mario A Cypko, Matthaeus Stoehr, Andreas Dietz, Thomas Neumuth, Stefan Franke, and Steffen Oeltze-Jafra. Modeling and processing up-to-dateness of patient information in probabilistic therapy decision support. Artif. Intell. Med., (104)101842:101842, Elsevier BV, April 2020. [PUMA: Arden Decision Head Medical Therapy and decision delay; logic model modules; neck oncology; support syntax; system;]

Ariel Iporre-Rivas, Dorothee Saur, Karl Rohr, Gerik Scheuermann, and Christina Gillmann. Stroke-GFCN: ischemic stroke lesion prediction with a fully convolutional graph network. J. Med. Imaging (Bellingham), (10)4:044502, SPIE-Intl Soc Optical Eng, July 2023. [PUMA: topic_visualcomputing graph imaging; learning; machine medical multi-modal networks; neural prediction stroke]