Quasi-best match graphs. Discrete Applied Mathematics, (331):104--125, 2023. [PUMA: Best Colored Hierarchies, Phylogenetic Rooted combinatorics, directed graphs, matches topic_mathfoundation trees, yaff] URL
A workflow to identify novel proteins based on the direct mapping of peptide-spectrum-matches to genomic locations. BMC Bioinformatics, (22)1:277, Springer Science and Business Media LLC, Mai 2021. [PUMA: Metaproteogenomics Microbial Peptide-spectrum Small communitities matches proteins yaff]