Publications

Shahbaz Syed, Timon Ziegenbein, Philipp Heinisch, Henning Wachsmuth, and Martin Potthast. Frame-oriented Summarization of Argumentative Discussions. Proceedings of the 24th Meeting of the Special Interest Group on Discourse and Dialogue, 114–129, Association for Computational Linguistics, 2023. [PUMA: imported] URL

Maik Fröbe, Harrisen Scells, Theresa Elstner, Christopher Akiki, Lukas Gienapp, Jan Heinrich Reimer, Sean MacAvaney, Benno Stein, Matthias Hagen, and Martin Potthast. Resources for Combining Teaching and Research in Information Retrieval Coursework. Proceedings of the 47th International ACM SIGIR Conference on Research and Development in Information Retrieval, 1115–1125, ACM, July 2024. [PUMA: imported] URL

Negin Malekian, Srividhya Sainath, Ali Al-Fatlawi, and Michael Schroeder. Word-based GWAS harnesses the rich potential of genomic data for E. coli quinolone resistance. Frontiers in Microbiology, (14)Frontiers Media SA, December 2023. [PUMA: imported] URL

Philipp Schake, Klevia Dishnica, Florian Kaiser, Christoph Leberecht, V. Joachim Haupt, and Michael Schroeder. An interaction-based drug discovery screen explains known SARS-CoV-2 inhibitors and predicts new compound scaffolds. Scientific Reports, (13)1Springer Science and Business Media LLC, June 2023. [PUMA: imported] URL

Abibe Useini, Inken Kaja Schwerin, Georg Künze, and Norbert Sträter. Structural Studies on the Binding Mode of Bisphenols to PPARγ. Biomolecules, (14)6:640, MDPI AG, May 2024. [PUMA: imported] URL

Melissa F. Adasme, Sarah Naomi Bolz, Ali Al-Fatlawi, and Michael Schroeder. Decomposing compounds enables reconstruction of interaction fingerprints for structure-based drug screening. Journal of Cheminformatics, (14)1Springer Science and Business Media LLC, March 2022. [PUMA: imported] URL

Christine Bauer, Ben Carterette, Nicola Ferro, Norbert Fuhr, Joeran Beel, Timo Breuer, Charles LA Clarke, Anita Crescenzi, Gianluca Demartini, Giorgio Maria Di Nunzio, and others. Report on the Dagstuhl Seminar on Frontiers of Information Access Experimentation for Research and Education. ACM SIGIR Forum, (57)1:1--28, 2023. [PUMA: imported]

Eva Zangerle, Maximilian Mayerl, Martin Potthast, and Benno Stein. Overview of the Multi-Author Writing Style Analysis Task at PAN 2023.. CLEF (Working Notes), 2513--2522, 2023. [PUMA: imported]

Matti Wiegmann, Magdalena Wolska, Martin Potthast, and Benno Stein. Overview of the Trigger Detection Task at PAN 2023.. CLEF (Working Notes), 2523--2536, 2023. [PUMA: imported]

Kortney Melancon, Palina Pliushcheuskaya, Jens Meiler, and Georg Künze. Targeting ion channels with ultra-large library screening for hit discovery. Frontiers in Molecular Neuroscience, (16)Frontiers Media SA, January 2024. [PUMA: imported] URL

Shahbaz Syed, Khalid Al Khatib, and Martin Potthast. TL;DR Progress: Multi-faceted Literature Exploration in Text Summarization. In Nikolaos Aletras, and Orphee De Clercq (Eds.), Proceedings of the 18th Conference of the European Chapter of the Association for Computational Linguistics: System Demonstrations, 195--206, Association for Computational Linguistics, St. Julians, Malta, March 2024. [PUMA: imported] URL

Aleksandra Piktus, Odunayo Ogundepo, Christopher Akiki, Akintunde Oladipo, Xinyu Zhang, Hailey Schoelkopf, Stella Biderman, Martin Potthast, and Jimmy Lin. GAIA Search: Hugging Face and Pyserini Interoperability for NLP Training Data Exploration. Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics (Volume 3: System Demonstrations), 588–598, Association for Computational Linguistics, 2023. [PUMA: imported] URL

Niklas Deckers, and Martin Potthast. Towards the Reproducible Evaluation of Generative Information Retrieval Systems. Workshop on the impact of generative AI on search and search engine research, September 2023. [PUMA: imported]

Maik Fröbe, Jan Heinrich Reimer, Sean MacAvaney, Niklas Deckers, Simon Reich, Janek Bevendorff, Benno Stein, Matthias Hagen, and Martin Potthast. The Information Retrieval Experiment Platform (Extended Abstract). Proceedings of the Thirty-ThirdInternational Joint Conference on Artificial Intelligence, 8405–8410, International Joint Conferences on Artificial Intelligence Organization, August 2024. [PUMA: imported] URL

Nandan Thakur, Luiz Bonifacio, Maik Fröbe, Alexander Bondarenko, Ehsan Kamalloo, Martin Potthast, Matthias Hagen, and Jimmy Lin. Systematic Evaluation of Neural Retrieval Models on the Touché 2020 Argument Retrieval Subset of BEIR. Proceedings of the 47th International ACM SIGIR Conference on Research and Development in Information Retrieval, 1420–1430, ACM, July 2024. [PUMA: imported] URL

Johannes Schimunek, Philipp Seidl, Katarina Elez, Tim Hempel, Tuan Le, Frank Noé, Simon Olsson, Lluís Raich, Robin Winter, Hatice Gokcan, Filipp Gusev, Evgeny M. Gutkin, Olexandr Isayev, Maria G. Kurnikova, Chamali H. Narangoda, Roman Zubatyuk, Ivan P. Bosko, Konstantin V. Furs, Anna D. Karpenko, Yury V. Kornoushenko, Mikita Shuldau, Artsemi Yushkevich, Mohammed B. Benabderrahmane, Patrick Bousquet‐Melou, Ronan Bureau, Beatrice Charton, Bertrand C. Cirou, Gérard Gil, William J. Allen, Suman Sirimulla, Stanley Watowich, Nick Antonopoulos, Nikolaos Epitropakis, Agamemnon Krasoulis, Vassilis Pitsikalis, Stavros Theodorakis, Igor Kozlovskii, Anton Maliutin, Alexander Medvedev, Petr Popov, Mark Zaretckii, Hamid Eghbal‐Zadeh, Christina Halmich, Sepp Hochreiter, Andreas Mayr, Peter Ruch, Michael Widrich, Francois Berenger, Ashutosh Kumar, Yoshihiro Yamanishi, Kam Y. J. Zhang, Emmanuel Bengio, Yoshua Bengio, Moksh J. Jain, Maksym Korablyov, Cheng‐Hao Liu, Gilles Marcou, Enrico Glaab, Kelly Barnsley, Suhasini M. Iyengar, Mary Jo Ondrechen, V. Joachim Haupt, Florian Kaiser, Michael Schroeder, Luisa Pugliese, Simone Albani, Christina Athanasiou, Andrea Beccari, Paolo Carloni, Giulia D’Arrigo, Eleonora Gianquinto, Jonas Goßen, Anton Hanke, Benjamin P. Joseph, Daria B. Kokh, Sandra Kovachka, Candida Manelfi, Goutam Mukherjee, Abraham Muñiz‐Chicharro, Francesco Musiani, Ariane Nunes‐Alves, Giulia Paiardi, Giulia Rossetti, S. Kashif Sadiq, Francesca Spyrakis, Carmine Talarico, Alexandros Tsengenes, Rebecca C. Wade, Conner Copeland, Jeremiah Gaiser, Daniel R. Olson, Amitava Roy, Vishwesh Venkatraman, Travis J. Wheeler, Haribabu Arthanari, Klara Blaschitz, Marco Cespugli, Vedat Durmaz, Konstantin Fackeldey, Patrick D. Fischer, Christoph Gorgulla, Christian Gruber, Karl Gruber, Michael Hetmann, Jamie E. Kinney, Krishna M. Padmanabha Das, Shreya Pandita, Amit Singh, Georg Steinkellner, Guilhem Tesseyre, Gerhard Wagner, Zi‐Fu Wang, Ryan J. Yust, Dmitry S. Druzhilovskiy, Dmitry A. Filimonov, Pavel V. Pogodin, Vladimir Poroikov, Anastassia V. Rudik, Leonid A. Stolbov, Alexander V. Veselovsky, Maria De Rosa, Giada De Simone, Maria R. Gulotta, Jessica Lombino, Nedra Mekni, Ugo Perricone, Arturo Casini, Amanda Embree, D. Benjamin Gordon, David Lei, Katelin Pratt, Christopher A. Voigt, Kuang‐Yu Chen, Yves Jacob, Tim Krischuns, Pierre Lafaye, Agnès Zettor, M. Luis Rodríguez, Kris M. White, Daren Fearon, Frank Von Delft, Martin A. Walsh, Dragos Horvath, Charles L. Brooks, Babak Falsafi, Bryan Ford, Adolfo García‐Sastre, Sang Yup Lee, Nadia Naffakh, Alexandre Varnek, Günter Klambauer, and Thomas M. Hermans. A community effort in SARS‐CoV‐2 drug discovery. Molecular Informatics, (43)1Wiley, November 2023. [PUMA: imported] URL

Lukas Gienapp, Wolfgang Kircheis, Bjarne Sievers, Benno Stein, and Martin Potthast. A large dataset of scientific text reuse in Open-Access publications. Scientific Data, (10)1:58, Nature Publishing Group UK London, 2023. [PUMA: imported]

Michael Granitzer, Stefan Voigt, Noor Afshan Fathima, Martin Golasowski, Christian Guetl, Tobias Hecking, Gijs Hendriksen, Djoerd Hiemstra, Jan Martinovic, Jelena Mitrović, and others. Impact and development of an Open Web Index for open web search. Journal of the Association for Information Science and Technology, (75)5:512--520, Wiley Online Library, 2024. [PUMA: imported]

Timon Ziegenbein, Shahbaz Syed, Felix Lange, Martin Potthast, and Henning Wachsmuth. Modeling Appropriate Language in Argumentation. Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), 4344–4363, Association for Computational Linguistics, 2023. [PUMA: imported] URL

Vahid Sadiri Javadi, Martin Potthast, and Lucie Flek. OpinionConv: Conversational Product Search with Grounded Opinions. Proceedings of the 24th Meeting of the Special Interest Group on Discourse and Dialogue, 66–76, Association for Computational Linguistics, 2023. [PUMA: imported] URL