Publications

Thomas Gatter, Sarah von Löhneysen, Jörg Fallmann, Polina Drozdova, Tom Hartmann, and Peter F Stadler. LazyB: fast and cheap genome assembly. Algorithms Mol. Biol., (16)1:8, Springer Science and Business Media LLC, June 2021. [PUMA: Anchors; Genome Illumina Nanopore Spanning Unitigs assembly; sequencing; tree;]

Adam Nunn, Christian Otto, Peter F Stadler, and David Langenberger. Comprehensive benchmarking of software for mapping whole genome bisulfite data: from read alignment to DNA methylation analysis. Brief. Bioinform., (22)5Oxford University Press (OUP), September 2021. [PUMA: DNA WGBS benchmark; bisulfite epigenetics; genome mapping methylation; non-model plants; sequencing software; whole]

Martin Pippel, David Jebb, Franziska Patzold, Sylke Winkler, Heiko Vogel, Gene Myers, Michael Hiller, and Anna K Hundsdoerfer. A highly contiguous genome assembly of the bat hawkmoth Hyles vespertilio (Lepidoptera: Sphingidae). Gigascience, (9)1Oxford University Press (OUP), January 2020. [PUMA: PacBio annotation; assembly; comparison gene genome hawkmoth-silk long moth reads; topic_lifescience]

A D Lokits, H Indrischek, J Meiler, H E Hamm, and P F Stadler. Tracing the evolution of the heterotrimeric G protein $\alpha$ subunit in Metazoa. BMC Evol. Biol., (18)1:51, April 2018. [PUMA: Evolution; G Genome Heterotrimeric Orthology; Paralog; Whole annotation; coupled duplication genome protein protein; receptors; topic_lifescience]