Publications

Mateusz Susik, and Ivo F. Sbalzarini. Analysis of the Hamiltonian Monte Carlo genotyping algorithm on PROVEDIt mixtures including a novel precision benchmark. Forensic Science International: Genetics, (64):102840, 2023. [PUMA: DNA HMC Probabilistic Validation, genotyping, mixtures,] URL

Adam Nunn, Christian Otto, Peter F Stadler, and David Langenberger. Comprehensive benchmarking of software for mapping whole genome bisulfite data: from read alignment to DNA methylation analysis. Brief. Bioinform., (22)5Oxford University Press (OUP), September 2021. [PUMA: DNA WGBS benchmark; bisulfite epigenetics; genome mapping methylation; non-model plants; sequencing software; whole]