Publications

Markus Bauer, Lennart Schneider, Marit Bernhardt, Christoph Augenstein, Glen Kristiansen, and Bogdan Franczyk. An Open-Source Approach for Digital Prostate Cancer Histopathology: Bringing AI into Practice. Proceedings of the 26th International Conference on Enterprise Information Systems - Volume 1: ICEIS, 729-738, SciTePress, 2024. [PUMA: Histopatholog Cancer Digital AI Prostate Open-Source]

Scarlet Brockmoeller, Amelie Echle, Narmin Ghaffari Laleh, Susanne Eiholm, Marie Louise Malmstrøm, Tine Plato Kuhlmann, Katarina Levic, Heike Irmgard Grabsch, Nicholas P West, Oliver Lester Saldanha, Katerina Kouvidi, Aurora Bono, Lara R Heij, Titus J Brinker, Ismayil Gögenür, Philip Quirke, and Jakob Nikolas Kather. Deep learning identifies inflamed fat as a risk factor for lymph node metastasis in early colorectal cancer. J. Pathol., (256)3:269--281, Wiley, March 2022. [PUMA: metastasis; inflamed intelligence; deep learning; bowel predictive LNM adipose pT2 pT1 digital biomarker; cancer; artificial AI; pathology; colorectal and topic_lifescience prediction new tissue; early]

Céline N Heinz, Amelie Echle, Sebastian Foersch, Andrey Bychkov, and Jakob Nikolas Kather. The future of artificial intelligence in digital pathology - results of a survey across stakeholder groups. Histopathology, (80)7:1121--1127, Wiley, June 2022. [PUMA: artificial intelligence; pathology; topic_lifescience survey digital]

David Nam, Julius Chapiro, Valerie Paradis, Tobias Paul Seraphin, and Jakob Nikolas Kather. Artificial intelligence in liver diseases: Improving diagnostics, prognostics and response prediction. JHEP Rep., (4)4:100443, Elsevier BV, April 2022. [PUMA: a disease; HCC, or intelligence; liver multivariable non-alcoholic multimodal ML, artificial WSIs, images; prediction support integration TACE, DICOM, AI, network; deep neural Digital Diagnosis; MVI, transarterial fatty topic_lifescience microvascular convolutional in learning; imaging; Communications invasion; NAFLD, chemoembolisation; hepatocellular Reporting steatohepatitis; Transparent Individual slide machine Prognosis Artificial data for NASH, whole Medicine; TRIPOD, of CNN, and Imaging carcinoma; diagnostic system; model]

Anna Niarakis, Reinhard Laubenbacher, Gary An, Yaron Ilan, Jasmin Fisher, Åsmund Flobak, Kristin Reiche, María Rodríguez Martínez, Liesbet Geris, Luiz Ladeira, Lorenzo Veschini, Michael L. Blinov, Francesco Messina, Luis L. Fonseca, Sandra Ferreira, Arnau Montagud, Vincent Noël, Malvina Marku, Eirini Tsirvouli, Marcella Torres, Leonard A. Harris, T.J. Sego, Chase Cockrell, Amanda Shick, Hasan Balci, Albin Salazar, Kinza Rian, Ahmed Abdelmonem Hemedan, Marina Esteban-Medina, Bernard Staumont, Esteban Hernandez-Vargas, Shiny Martis B., Alejandro Madrid-Valiente, Panagiotis Karampelesis, Luis Sordo Vieira, Pradyumna Harlapur, Alexander Kulesza, Niloofar Nikaein, Winston Garira, Rahuman S. Malik Sheriff, Juilee Thakar, Van Du T. Tran, Jose Carbonell-Caballero, Soroush Safaei, Alfonso Valencia, Andrei Zinovyev, and James A. Glazier. Building an international and interdisciplinary community to develop immune digital twins for complex human pathologies. Zenodo, 2024. [PUMA: twin immune system collaboration model computational effort community digital interdisciplinary] URL