Publications

Neringa Jurenaite, Daniel Leon-Perinan, Veronika Donath, Sunna Torge, and Rene Jakel. SetQuence & SetOmic: Deep Set Transformer-based Representations of Cancer Multi-Omics. 2022 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2022, 139--147, IEEE, New York u. a., United States of America, 2022. [PUMA: topic_federatedlearn livinglab Deep FIS_scads Network, Neural Representations Set analysis, expression, gene genome, language molecular multi-omics, mutome, natural processing, sequence]

Matti Wiegmann, Jennifer Rakete, Magdalena Wolska, Benno Stein, and Martin Potthast. If there's a Trigger Warning, then where's the Trigger? Investigating Trigger Warnings at the Passage Level. arXiv, 2024. [PUMA: topic_language (cs.CL), (cs.CY), Computation Computer Computers FOS: Language Society and information sciences sciences,] URL

Kim Breitwieser, Allison Lahnala, Charles Welch, Lucie Flek, and Martin Potthast. Modeling Proficiency with Implicit User Representations. arXiv, 2021. [PUMA: (cs.CL), Computation Computer FOS: Language and information sciences sciences,] URL

Patryk Burek, Nico Scherf, and Heinrich Herre. Ontology patterns for the representation of quality changes of cells in time. J. Biomed. Semantics, (10)1:16, Springer Science and Business Media LLC, October 2019. [PUMA: Cell Design Ontology; Web language ontology patterns; tracking;]