Are the chemical families still there? Formal structure of similarity of elements and its thermochemical domain. Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences, (480)2298The Royal Society, September 2024. [PUMA: Formal chemical families similarity structure zno] URL
Accuracy of RNA Structure Prediction Depends on the Pseudoknot Grammar. Advances in Bioinformatics and Computational Biology, 20–31, Springer Nature Switzerland, 2022. [PUMA: DependsPseudoknot Grammar Prediction RNA Structure nopdf] URL
Targeting adhesion G protein-coupled receptors. Current status and future perspectives. Structure, Elsevier, November 2024. [PUMA: ADGRG1 ADGRG2 ADGRG3 ADGRG5 ADGRG6 ADGRG7 GPCRs GPR114 GPR126 GPR128 GPR56 GPR64 GPR97 adhesion area_bigdata discovery drug ep ligands molecules small structure topic_lifescience xack yaff]
Modeling of protein conformational changes with Rosetta guided by limited experimental data. Structure, (30)8:1157--1168.e3, Elsevier BV, August 2022. [PUMA: EPR Rosetta biology changes conformational dynamics integrative modeling molecular protein refinement spectroscopy structural structure topic_lifescience zno]
RosettaCM for antibodies with very long HCDR3s and low template availability. Proteins, (89)11:1458--1472, Wiley, November 2021. [PUMA: Rosetta antibody benchmark homology loop modeling prediction structure topic_lifescience zno]
RNA secondary structures with limited base pair span: Exact backtracking and an application. Genes (Basel), (12)1:14, MDPI AG, December 2020. [PUMA: RNA algorithm elements hyper-stable prediction scanning secondary structure yaff]
Sparse pseudocontact shift NMR data obtained from a non-canonical amino acid-linked lanthanide tag improves integral membrane protein structure prediction. J. Biomol. NMR, (77)3:69--82, June 2023. [PUMA: (IMPs) (PCSs) (ncAAs) Click Integral Non-canonical Pseudocontact Rosetta Structure acids amino chemistry membrane prediction proteins shifts topic_lifescience zno]