Publications

Qinghe Zeng, Christophe Klein, Stefano Caruso, Pascale Maille, Narmin Ghaffari Laleh, Daniele Sommacale, Alexis Laurent, Giuliana Amaddeo, David Gentien, Audrey Rapinat, Hélène Regnault, Cécile Charpy, Cong Trung Nguyen, Christophe Tournigand, Raffaele Brustia, Jean Michel Pawlotsky, Jakob Nikolas Kather, Maria Chiara Maiuri, Nicolas Loménie, and Julien Calderaro. Artificial intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology. J. Hepatol., (77)1:116--127, Elsevier BV, July 2022. [PUMA: topic_lifescience artificial deep gene image immune intelligence; learning; pathology; signatures; slide whole]

Alexander Kurz, Katja Hauser, Hendrik Alexander Mehrtens, Eva Krieghoff-Henning, Achim Hekler, Jakob Nikolas Kather, Stefan Fröhling, Christof von Kalle, and Titus Josef Brinker. Uncertainty estimation in medical image classification: Systematic review. JMIR Med. Inform., (10)8:e36427, August 2022. [PUMA: topic_lifescience calibration; classification; deep detection; estimation image imaging; learning; medical network out-of-distribution uncertainty]

Didem Cifci, Sebastian Foersch, and Jakob Nikolas Kather. Artificial intelligence to identify genetic alterations in conventional histopathology. J. Pathol., (257)4:430--444, Wiley, July 2022. [PUMA: topic_lifescience analysis; artificial biomarker; image intelligence; oncology precision]

Johannes Kiesel, Cagrı Cöltekin, Maximilian Heinrich, Maik Fröbe, Milad Alshomary, Bertrand De Longueville, Tomaz Erjavec, Nicolas Handke, Matyás Kopp, Nikola Ljubesić, Katja Meden, Nailia Mirzhakhmedova, Vaidas Morkevicius, Theresa Reitis-Münstermann, Mario Scharfbillig, Nicolas Stefanovitch, Henning Wachsmuth, Martin Potthast, and Benno Stein. Overview of Touché 2024: Argumentation Systems. Advances in Information Retrieval: 46th European Conference on Information Retrieval, ECIR 2024, Glasgow, UK, March 24–28, 2024, Proceedings, Part V, 466–473, Springer-Verlag, Berlin, Heidelberg, 2024. [PUMA: topic_language Argumentation, Human Ideology, Image retrieval values,] URL

Akshay Akshay, Mitali Katoch, Masoud Abedi, Navid Shekarchizadeh, Mustafa Besic, Fiona C Burkhard, Alex Bigger-Allen, Rosalyn M Adam, Katia Monastyrskaya, and Ali Hashemi Gheinani. SpheroScan: a user-friendly deep learning tool for spheroid image analysis. Gigascience, (12)Oxford University Press (OUP), December 2022. [PUMA: topic_federatedlearn 3D Image Mask R-CNN; analysis; deep high-throughput image learning; screening; segmentation spheroids;]