Publications

Timon Ziegenbein, Shahbaz Syed, Felix Lange, Martin Potthast, and Henning Wachsmuth. Modeling Appropriate Language in Argumentation. Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), 4344–4363, Association for Computational Linguistics, 2023. [PUMA: imported topic_language zno] URL

Efstathios Stamatatos, Krzysztof Kredens, Piotr Pezik, Annina Heini, Janek Bevendorff, Benno Stein, and Martin Potthast. Overview of the Authorship Verification Task at PAN 2023. In Mohammad Aliannejadi, Guglielmo Faggioli, Nicola Ferro, and Michalis Vlachos (Eds.), Working Notes of the Conference and Labs of the Evaluation Forum (CLEF 2023), (3497):2476--2491, September 2023. [PUMA: imported topic_language zno] URL

Christine Bauer, Ben Carterette, Nicola Ferro, Norbert Fuhr, Joeran Beel, Timo Breuer, Charles LA Clarke, Anita Crescenzi, Gianluca Demartini, Giorgio Maria Di Nunzio, and others. Report on the Dagstuhl Seminar on Frontiers of Information Access Experimentation for Research and Education. ACM SIGIR Forum, (57)1:1--28, 2023. [PUMA: imported topic_language zno]

Melissa F. Adasme, Sarah Naomi Bolz, Ali Al-Fatlawi, and Michael Schroeder. Decomposing compounds enables reconstruction of interaction fingerprints for structure-based drug screening. Journal of Cheminformatics, (14)1Springer Science and Business Media LLC, March 2022. [PUMA: imported topic_lifescience zno] URL

Philipp Schake, Klevia Dishnica, Florian Kaiser, Christoph Leberecht, V. Joachim Haupt, and Michael Schroeder. An interaction-based drug discovery screen explains known SARS-CoV-2 inhibitors and predicts new compound scaffolds. Scientific Reports, (13)1Springer Science and Business Media LLC, June 2023. [PUMA: imported topic_lifescience zno] URL

Johannes Schimunek, Philipp Seidl, Katarina Elez, Tim Hempel, Tuan Le, Frank Noé, Simon Olsson, Lluís Raich, Robin Winter, Hatice Gokcan, Filipp Gusev, Evgeny M. Gutkin, Olexandr Isayev, Maria G. Kurnikova, Chamali H. Narangoda, Roman Zubatyuk, Ivan P. Bosko, Konstantin V. Furs, Anna D. Karpenko, Yury V. Kornoushenko, Mikita Shuldau, Artsemi Yushkevich, Mohammed B. Benabderrahmane, Patrick Bousquet‐Melou, Ronan Bureau, Beatrice Charton, Bertrand C. Cirou, Gérard Gil, William J. Allen, Suman Sirimulla, Stanley Watowich, Nick Antonopoulos, Nikolaos Epitropakis, Agamemnon Krasoulis, Vassilis Pitsikalis, Stavros Theodorakis, Igor Kozlovskii, Anton Maliutin, Alexander Medvedev, Petr Popov, Mark Zaretckii, Hamid Eghbal‐Zadeh, Christina Halmich, Sepp Hochreiter, Andreas Mayr, Peter Ruch, Michael Widrich, Francois Berenger, Ashutosh Kumar, Yoshihiro Yamanishi, Kam Y. J. Zhang, Emmanuel Bengio, Yoshua Bengio, Moksh J. Jain, Maksym Korablyov, Cheng‐Hao Liu, Gilles Marcou, Enrico Glaab, Kelly Barnsley, Suhasini M. Iyengar, Mary Jo Ondrechen, V. Joachim Haupt, Florian Kaiser, Michael Schroeder, Luisa Pugliese, Simone Albani, Christina Athanasiou, Andrea Beccari, Paolo Carloni, Giulia D’Arrigo, Eleonora Gianquinto, Jonas Goßen, Anton Hanke, Benjamin P. Joseph, Daria B. Kokh, Sandra Kovachka, Candida Manelfi, Goutam Mukherjee, Abraham Muñiz‐Chicharro, Francesco Musiani, Ariane Nunes‐Alves, Giulia Paiardi, Giulia Rossetti, S. Kashif Sadiq, Francesca Spyrakis, Carmine Talarico, Alexandros Tsengenes, Rebecca C. Wade, Conner Copeland, Jeremiah Gaiser, Daniel R. Olson, Amitava Roy, Vishwesh Venkatraman, Travis J. Wheeler, Haribabu Arthanari, Klara Blaschitz, Marco Cespugli, Vedat Durmaz, Konstantin Fackeldey, Patrick D. Fischer, Christoph Gorgulla, Christian Gruber, Karl Gruber, Michael Hetmann, Jamie E. Kinney, Krishna M. Padmanabha Das, Shreya Pandita, Amit Singh, Georg Steinkellner, Guilhem Tesseyre, Gerhard Wagner, Zi‐Fu Wang, Ryan J. Yust, Dmitry S. Druzhilovskiy, Dmitry A. Filimonov, Pavel V. Pogodin, Vladimir Poroikov, Anastassia V. Rudik, Leonid A. Stolbov, Alexander V. Veselovsky, Maria De Rosa, Giada De Simone, Maria R. Gulotta, Jessica Lombino, Nedra Mekni, Ugo Perricone, Arturo Casini, Amanda Embree, D. Benjamin Gordon, David Lei, Katelin Pratt, Christopher A. Voigt, Kuang‐Yu Chen, Yves Jacob, Tim Krischuns, Pierre Lafaye, Agnès Zettor, M. Luis Rodríguez, Kris M. White, Daren Fearon, Frank Von Delft, Martin A. Walsh, Dragos Horvath, Charles L. Brooks, Babak Falsafi, Bryan Ford, Adolfo García‐Sastre, Sang Yup Lee, Nadia Naffakh, Alexandre Varnek, Günter Klambauer, and Thomas M. Hermans. A community effort in SARS‐CoV‐2 drug discovery. Molecular Informatics, (43)1Wiley, November 2023. [PUMA: imported topic_lifescience zno] URL

Negin Malekian, Amay A. Agrawal, Thomas U. Berendonk, Ali Al-Fatlawi, and Michael Schroeder. A genome-wide scan of wastewater E. coli for genes under positive selection: focusing on mechanisms of antibiotic resistance. Scientific Reports, (12)1Springer Science and Business Media LLC, May 2022. [PUMA: imported topic_lifescience zno] URL

Ali Al-Fatlawi, Nazia Afrin, Cigdem Ozen, Negin Malekian, and Michael Schroeder. NetRank Recovers Known Cancer Hallmark Genes as Universal Biomarker Signature for Cancer Outcome Prediction. Frontiers in Bioinformatics, (2)Frontiers Media SA, March 2022. [PUMA: imported topic_lifescience zno] URL

Jan Engelhardt, Oliver Scheer, Peter Stadler, and Sonja Prohaska. Evolution of DNA Methylation Across Ecdysozoa. Journal of Molecular Evolution, (90)January 2022. [PUMA: topic_mathfoundation zno]

Lummy Maria Monteiro, Joao Saraiva, Rodolfo Toscan, Peter Stadler, Rafael Silva-Rocha, and Ulisses Nunes da Rocha. PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning. Environmental Microbiome, (17)December 2022. [PUMA: PredicTF: Zno bacterial complex learning microbialdeep prediction transcription]

Siavash Ghiasvand. UPAD: Unsupervised privacy-aware anomaly detection in high performance computing systems. Proceedings of the 8th International Conference on Pattern Recognition Applications and Methods, SCITEPRESS - Science and Technology Publications, 2019. [PUMA: zno]

Siavash Ghiasvand, and Florina M. Ciorba. Anomaly Detection in High Performance Computers: A Vicinity Perspective. 2019 18th International Symposium on Parallel and Distributed Computing (ISPDC), IEEE, June 2019. [PUMA: zno]