Publications

Iris Marie Anders, Carolin Schimmelpfennig, Karolin Wiedemann, Dennis Löffler, Christoph Kämpf, Conny Blumert, Kristin Reiche, Manfred Kunz, Ulf Anderegg, Jan‐Christoph Simon, and Mirjana Ziemer. Atypical fibroxanthoma and pleomorphic dermal sarcoma – gene expression analysis compared with undifferentiated cutaneous squamous cell carcinoma. JDDG: Journal der Deutschen Dermatologischen Gesellschaft, (21)5:482–491, Wiley, April 2023. [PUMA: cutaneous undifferentiated pleomorphic carcinoma sarcoma fibroxanthoma Atypical from:scadsfct cell dermal] URL

M Alb, H Einsele, P Loskill, A Van der Meer, K Sewald, K Reiche, U Koehl, and M Hudecek. New Strategies to improve the Safety of CAR-T Cell Immunotherapy: the imSAVAR Project. ONCOLOGY RESEARCH AND TREATMENT, (45)SUPPL 2:70--71, 2022. [PUMA: CAR-T Cell Immunotherapy Project Safety Strategiese imSAVAR]

Bouchra Derraz, Gabriele Breda, Christoph Kaempf, Franziska Baenke, Fabienne Cotte, Kristin Reiche, Ulrike Köhl, Jakob Nikolas Kather, Deborah Eskenazy, and Stephen Gilbert. New regulatory thinking is needed for AI-based personalised drug and cell therapies in precision oncology. npj Precision Oncology, (8)1Springer Science and Business Media LLC, January 2024. [PUMA: AI-based Yaff cell drug oncology precision regulatory therapies thinking] URL

Praveen Vasudevan, Markus Wolfien, Heiko Lemcke, Cajetan Immanuel Lang, Anna Skorska, Ralf Gaebel, Anne-Marie Galow, Dirk Koczan, Tobias Lindner, Wendy Bergmann, Brigitte Mueller-Hilke, Brigitte Vollmar, Bernd Joachim Krause, Olaf Wolkenhauer, Gustav Steinhoff, and Robert David. CCR2 macrophage response determines the functional outcome following cardiomyocyte transplantation. Genome medicine, (15)1BioMed Central, London, Aug 10, 2023. [PUMA: topic_lifescience Animals, C57BL, Cardiac/metabolism, Cell FIS_scads Immunocompromised, Inbred Infarction, Machine Macrophages, Macrophages/metabolism, Mice, Monocytes/metabolism Myocardial Myocytes, Single-cell, infarction, learning, therapy,]

Karen G. Soans, Ana Patricia Ramos, Jaydeep Sidhaye, Abhijeet Krishna, Anastasia Solomatina, Karl B. Hoffmann, Raimund Schl��ler, Jochen Guck, Ivo F. Sbalzarini, Carl D. Modes, and Caren Norden. Collective cell migration during optic cup formation features changing cell-matrix interactions linked to matrix topology. Current Biology, (32)22:4817--4831.e9, 2022. [PUMA: topic_lifescience cell collective cup, matrix migration, optic simulation topology topology, zebrafish,] URL

Patryk Burek, Nico Scherf, and Heinrich Herre. Ontology patterns for the representation of quality changes of cells in time. J. Biomed. Semantics, (10)1:16, Springer Science and Business Media LLC, October 2019. [PUMA: Cell Design Ontology; Web language ontology patterns; tracking;]

Dirk Zeckzer, Alrik Hausdorf, Nicole Hinzmann, Lydia Müller, and Daniel Wiegreffe. Masakari: visualization supported statistical analysis of genome segmentations. BMC Bioinformatics, (21)1:437, Springer Science and Business Media LLC, October 2020. [PUMA: Cell ChIP-seq; Chromatin Histone development; modifications state;]